Hi Everyone, I'm trying to use cutree to get the clusters after hclust. What I used is: mycluster<-cutree(cnclust,h=0.5) Now, my problem is, how can I get the actual clusters? Thanks! Best, Baoqiang Cao
about cutree
3 messages · Baoqiang Cao, Stephen D. Weigand, Romain Francois
On Sep 15, 2005, at 10:26 AM, Baoqiang Cao wrote:
Hi Everyone, I'm trying to use cutree to get the clusters after hclust. What I used is: mycluster<-cutree(cnclust,h=0.5) Now, my problem is, how can I get the actual clusters? Thanks! Best, Baoqiang Cao
Doesn't print(mycluster) give you the clusters? You could use something like: R> split(names(mycluster), mycluster) You may need to better define "get the actual clusters" to get a better answer. Stephen
Le 15.09.2005 17:26, Baoqiang Cao a ??crit :
Hi Everyone, I'm trying to use cutree to get the clusters after hclust. What I used is: mycluster<-cutree(cnclust,h=0.5) Now, my problem is, how can I get the actual clusters? Thanks! Best, Baoqiang Cao
Hello, If you mean getting the labels in the same order than presented by the dendrogram (( Why isn't it the default BTW )), try using cutree.order in package A2R here http://addictedtor.free.fr/packages/A2R/ Regards, Romain
visit the R Graph Gallery : http://addictedtor.free.fr/graphiques ~~~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~ ~~~~~~ Romain FRANCOIS - http://addictedtor.free.fr ~~~~~~ ~~~~ Etudiant ISUP - CS3 - Industrie et Services ~~~~ ~~ http://www.isup.cicrp.jussieu.fr/ ~~ ~~~~ Stagiaire INRIA Futurs - Equipe SELECT ~~~~ ~~~~~~ http://www.inria.fr/recherche/equipes/select.fr.html ~~~~~~ ~~~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~