[R-pkg-devel] Regarding maGUI package error
Hi. Following is the check results from CRAN server, though I didn't get any warning on my PC. package maGUI_2.3.tar.gz does not pass the incoming checks automatically, please see the following pre-tests: Windows: < https://win-builder.r-project.org/incoming_pretest/maGUI_2.3_20190217_181340/Windows/00check.log
Status: 1 WARNING, 1 NOTE Debian: < https://win-builder.r-project.org/incoming_pretest/maGUI_2.3_20190217_181340/Debian/00check.log
Status: 1 NOTE Last released version's CRAN status: ERROR: 2 See: <https://CRAN.R-project.org/web/checks/check_results_maGUI.html <https://cran.r-project.org/web/checks/check_results_maGUI.html>> CRAN Web: <https://cran.r-project.org/package=maGUI> Please fix all problems and resubmit a fixed version via the webform. If you are not sure how to fix the problems shown, please ask for help on the R-package-devel mailing list: <https://stat.ethz.ch/mailman/listinfo/r-package-devel> If you are fairly certain the rejection is a false positive, please reply-all to this message and explain. More details are given in the directory: < https://win-builder.r-project.org/incoming_pretest/maGUI_2.3_20190217_181340/
The files will be removed after roughly 7 days.
No strong reverse dependencies to be checked.
Best regards,
CRAN teams' auto-check service
Flavor: r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64
Check: CRAN incoming feasibility, Result: NOTE
Maintainer: 'Dhammapal Bharne <dhammapalb at uohyd.ac.in>'
New submission
Package was archived on CRAN
CRAN repository db overrides:
X-CRAN-Comment: Archived on 2018-11-01 as check warnings were not
corrected despite a month's notice.
Needed change for BioC 3.8
Flavor: r-devel-windows-ix86+x86_64
Check: whether package can be installed, Result: WARNING
Found the following significant warnings:
Warning: 'BiocInstaller' and 'biocLite()' are deprecated, use the
'BiocManager' CRAN
See 'd:/RCompile/CRANincoming/R-devel/maGUI.Rcheck/00install.out' for
details.
Flavor: r-devel-windows-ix86+x86_64
Check: Overall checktime, Result: NOTE
Overall checktime 11 min > 10 min
On Wed, 20 Feb 2019, 2:36 am Duncan Murdoch <murdoch.duncan at gmail.com wrote:
On 19/02/2019 11:47 a.m., dhamma pal wrote:
Dear all. The current version of the maGUI package is 2.2 which got errors after
the
upgradation of R version. Therefore I was trying to submit new version 2.3 of the package but
getting
warnings of the previous version of 2.2 at the CRAN incoming Precheck server. To resolve this, Do I need to upload the corrected package with the 2.2 version? or How to rectify the errors of the previous version the packages at the CRAN repository? Note: The error message is that "BiocInstaller and biocLite packages are depreciated. Use BiocManager instead." Therefore I have replaced these packages with BiocManager package. But now It couldn't upload at CRAN because of the errors in the previous version.
I suspect your interpretation of the messages you've received could be incorrect. Could you post a copy of it if it came by email, or a link if it's on a web page? One reason you may have trouble uploading a revision is that you were unresponsive to requests for fixes in the previous one, and your package has been archived: see https://cran.r-project.org/web/packages/maGUI/index.html and https://cran-archive.r-project.org/web/checks/2018-11-01_check_results_maGUI.html The stuff about the Bioconductor packages is shown as warnings, but you also have errors. Did you fix everything? Duncan Murdoch