[R-pkg-devel] CRAN Package error

On 30.11.2017 12:52, Andrew Holding wrote:
[...] I know the new Bioconductor on devel is unstable [...]

Dear Uwe,

Just submitted the package again and got the same error. I?ve copied it
below for reference.

Andy

 Found the following significant warnings:

  Warning: namespace 'BiocFileCache' is not available and has been replaced
  Warning: namespace 'AnnotationFilter' is not available and has been replaced
  Warning: namespace 'Organism.dplyr' is not available and has been replaced
See 'd:/RCompile/CRANincoming/R-devel/Brundle.Rcheck/00install.out' for details.


On Thu, 30 Nov 2017 at 22:18 Uwe Ligges <ligges at statistik.tu-dortmund.de>
wrote:

Have you submitted a second time? Sounds like BioC wasa uodated on the
build machine when you submitted.

Best,
Uwe Ligges



On 30.11.2017 12:52, Andrew Holding wrote:

Hi all,

I?m trying to upload a new version of my package and it was automatically
bounced because of the following warnings:

Warning: namespace 'BiocFileCache' is not available and has been replaced

Warning: namespace 'AnnotationFilter' is not available and has been

replaced

Warning: namespace 'Organism.dplyr' is not available and has been

replaced

Theses all seem to be related to the bioconductor annotation in one of

the

loaded packages. I know the new Bioconductor on devel is unstable but I
thought I should check before suggesting the pretest rejection was a

false

positive to see if there was a resolution.

Cheers,

Andy

--
Dr Andrew Holding
Fellow of Biochemistry / Senior Research Associate
Downing College / Cancer Research UK Cambridge Institute
CRUK CI: 01223 769696
Mobile: 07595 666459

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