[R-pkg-devel] NAMESPACE issue and grDevices
I think yes. If a direct user of graphics opted not to call smoothScatter then they would have no need to even install KernSmooth. However, since generics automatically trigger loading of class-specific methods, one of which in your case includes that dependency, your package cannot avoid at least importing KernSmooth.
On August 24, 2019 7:36:44 AM PDT, Kevin Coombes <kevin.r.coombes at gmail.com> wrote:
Hi,
I've been building a package and hit a NAMESPACE issue that took a
while
to resolve.
My package implements a (new) generic function, and the method for a
package in the class calls the "smoothScatter" function from the
"graphics" package. I could build and install the package successfully,
and when I used the generic function, it worked just fine.
However, when I ran "R CMD check --as-cran", it threw an error from
both
the examples in man pages and a test script. Specifically, the error
was
"package KernSmooth not available". I eventually worked around this
problem by changing the DESCRIPTION file to "IMPORT KernSmooth" (even
though I didn't have to actually import anything in "NAMESPACE").
The underlying issue appears to be that
??? graphics::smoothScatter
calls a non-exported function from "grDevices"
???? grDevices:::.smoothScatterCalcDensity
which in turn calls an explicitly qualified function from "KernSmooth"
??? KernSmooth::bkde2D
To complicate matters
??? graphics IMPORTs grDevices
but
??? grDevices only SUGGESTs KernSmooth.
Since my package already IMPORTed the graphics package and had
??? importFrom("graphics", "smoothScatter")
in the NAMESPACE, I was surprised that I had to track back through the
code to find this dependency and had to make it explicitly known within
the interface to my package.
Is there something else my package should do? Or should "grDevices"
actually IMPORT "KernSmooth"?
Best,
? Kevin
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