Message-ID: <CWXP265MB20082BC416C43418F094F23AAE4D9@CWXP265MB2008.GBRP265.PROD.OUTLOOK.COM>
Date: 2021-04-15T09:11:27Z
From: Georgi Boshnakov
Subject: [R-pkg-devel] Another newbie question: vignettes not appearing in GitHub hosted package
In-Reply-To: <2073689205.1245013.1618419190285.JavaMail.zimbra@psyctc.org>
Vignettes are not built by default when using remotes::install_github, request it explicitly:
remotes::install_github("cpsyctc/CECPfuns", build_vignettes = TRUE)
Georgi Boshnakov
-----Original Message-----
From: R-package-devel <r-package-devel-bounces at r-project.org> On Behalf Of Chris Evans
Sent: 14 April 2021 17:53
To: r-package-devel <r-package-devel at r-project.org>
Subject: [R-pkg-devel] Another newbie question: vignettes not appearing in GitHub hosted package
As ever, my package is https://github.com/cpsyctc/CECPfuns and I am building withing Rstudio 1.4.1103
I am aiming for the package to have fairly comprehensive vignettes and there are four now, but two are very incomplete.
The problem I have may relate to https://github.com/Kenkleinman/clusterPower/issues/113 and to
https://github.com/rstudio/rstudio/issues/1766 or it may not. I have a nasty feeling that I am just looking straight through something obvious.
When I run
browseVignettes(package = "CECPfuns")
within Rstudio working on the package I see the vignettes and I have now got pkgdown working to compile the lovely web site around the package (at https://cecpfuns.psyctc.org/) and I see the vignettes there and they update.
The bizarre thing that is beating me is that when I pull the package down to any machine with
remotes::install_github("cpsyctc/CECPfuns")
gets the function but no vignettes! Here's an example from my little Pi machine:
> remotes::install_github("cpsyctc/CECPfuns")
Downloading GitHub repo cpsyctc/CECPfuns at HEAD ? checking for file ?/tmp/RtmpPhD1Rg/remotes294e1d1ff9d6/cpsyctc-CECPfuns-ab23518/DESCRIPTION? (722ms) ? preparing ?CECPfuns?:
? checking DESCRIPTION meta-information ...
? installing the package to process help pages ? checking for LF line-endings in source and make files and shell scripts (13.7s) ? checking for empty or unneeded directories ? looking to see if a ?data/datalist? file should be added ? building ?CECPfuns_0.0.0.9041.tar.gz?
* installing *source* package ?CECPfuns? ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (CECPfuns)
> browseVignettes(package = "CECPfuns")
No vignettes found by browseVignettes(package = "CECPfuns")
I hope someone can see what I'm doing wrong! As ever, TIA,
Chris
--
Chris Evans (he/him) <chris at psyctc.org> Visiting Professor, University of Sheffield <chris.evans at sheffield.ac.uk>
I do some consultation work for the University of Roehampton <chris.evans at roehampton.ac.uk> and other places
but <chris at psyctc.org> remains my main Email address. I have a work web site at:
https://www.psyctc.org/psyctc/
and a site I manage for CORE and CORE system trust at:
http://www.coresystemtrust.org.uk/
I have "semigrated" to France, see:
https://www.psyctc.org/pelerinage2016/semigrating-to-france/
https://www.psyctc.org/pelerinage2016/register-to-get-updates-from-pelerinage2016/
If you want an Emeeting, I am trying to keep them to Thursdays and my diary is at:
https://www.psyctc.org/pelerinage2016/ceworkdiary/
Beware: French time, generally an hour ahead of UK.
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