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[R-pkg-devel] How to declare Bioconductor Dependencies in the Description File of my R Package

Ruff, Sergej 
In my example I have the following lines:


### Differential expression analysis with limma
group = gl(2, n)
design = model.matrix(~ group)
fit1 = limma::lmFit(X, design)
fit = limma::eBayes(fit1)

The R CMD Check returns no Errors or Notes if Limma is pre-installed. If limma is not pre-installed I get an error, reminding me that Limma is not available.


Thats the source of my worries. Will the same error appear when CRAN checks the examples of my package? Or should I not be worried?


With regards,


Sergej

Thread (32 messages)

Ruff, Sergej How to declare Bioconductor Dependencies in the Description File of my R Package Mar 16 Ivan Krylov How to declare Bioconductor Dependencies in the Description File of my R Package Mar 16 Tiago Olivoto How to declare Bioconductor Dependencies in the Description File of my R Package Mar 16 Ruff, Sergej How to declare Bioconductor Dependencies in the Description File of my R Package Mar 16 Duncan Murdoch How to declare Bioconductor Dependencies in the Description File of my R Package Mar 16 Tiago Olivoto How to declare Bioconductor Dependencies in the Description File of my R Package Mar 16 Tiago Olivoto How to declare Bioconductor Dependencies in the Description File of my R Package Mar 16 Ivan Krylov How to declare Bioconductor Dependencies in the Description File of my R Package Mar 16 Martin Morgan How to declare Bioconductor Dependencies in the Description File of my R Package Mar 16 Ruff, Sergej How to declare Bioconductor Dependencies in the Description File of my R Package Mar 17 Duncan Murdoch How to declare Bioconductor Dependencies in the Description File of my R Package Mar 17 Ruff, Sergej How to declare Bioconductor Dependencies in the Description File of my R Package Mar 17 Ivan Krylov How to declare Bioconductor Dependencies in the Description File of my R Package Mar 17 Ruff, Sergej How to declare Bioconductor Dependencies in the Description File of my R Package Mar 17 Ivan Krylov How to declare Bioconductor Dependencies in the Description File of my R Package Mar 17 Ruff, Sergej How to declare Bioconductor Dependencies in the Description File of my R Package Mar 17 Duncan Murdoch How to declare Bioconductor Dependencies in the Description File of my R Package Mar 17 Uwe Ligges How to declare Bioconductor Dependencies in the Description File of my R Package Mar 17 Ruff, Sergej How to declare Bioconductor Dependencies in the Description File of my R Package Mar 17 Uwe Ligges How to declare Bioconductor Dependencies in the Description File of my R Package Mar 17 Ivan Krylov How to declare Bioconductor Dependencies in the Description File of my R Package Mar 17 Duncan Murdoch How to declare Bioconductor Dependencies in the Description File of my R Package Mar 17 Ruff, Sergej How to declare Bioconductor Dependencies in the Description File of my R Package Mar 17 Simon Urbanek How to declare Bioconductor Dependencies in the Description File of my R Package Mar 17 Ruff, Sergej How to declare Bioconductor Dependencies in the Description File of my R Package Mar 17 Berry Boessenkool How to declare Bioconductor Dependencies in the Description File of my R Package Mar 18 Ruff, Sergej How to declare Bioconductor Dependencies in the Description File of my R Package Mar 18 Ruff, Sergej How to declare Bioconductor Dependencies in the Description File of my R Package Mar 20 Ruff, Sergej How to declare Bioconductor Dependencies in the Description File of my R Package Mar 20 Ivan Krylov How to declare Bioconductor Dependencies in the Description File of my R Package Mar 20 Ruff, Sergej How to declare Bioconductor Dependencies in the Description File of my R Package Mar 20 Ivan Krylov How to declare Bioconductor Dependencies in the Description File of my R Package Mar 20