Message-ID: <dae09744-b204-481b-90b6-4dc2862cafd4@gmail.com>
Date: 2024-12-17T10:03:42Z
From: Duncan Murdoch
Subject: [R-pkg-devel] [CRAN-pretest-archived] CRAN Submission NMRphasing 1.0.6
In-Reply-To: <YQBPR0101MB5045E4A7916B3292C50F54FFC6042@YQBPR0101MB5045.CANPRD01.PROD.OUTLOOK.COM>
On 2024-12-17 4:47 a.m., Aixiang Jiang wrote:
> Hi, team,
>
> I am really confused by the error, which did not happen in the previous versions.
>
> Since I have not changed my code at all, the possible reason is that the external function is changed. However, there is no error at all and all of my code runs successfully in my local machine.
>
> So, how to solve the issue?
The rejection came because of the gcc-san check. Those don't always
show symptoms if you aren't running the same diagnostic tool, so this
error could well have been present in earlier versions.
Looking at
https://win-builder.r-project.org/incoming_pretest/NMRphasing_1.0.6_20241217_091411/specialChecks/gcc-san/summary.txt,
I see that the error appears to have happened at
MassSpecWavelet/src/find_local_maximum.c:492, i.e. line 492 of that
file, which is writing outside the bounds of an allocated array.
I think that is coming from a package you are using, rather than from
your package NMRphasing. Maybe you can try working with the maintainer
of that package to work out whether the problem is in it or in the way
you are using it.
Duncan Murdoch
>
> Thanks!
> Aixiang
>
> ???Outlook for Android<https://aka.ms/AAb9ysg>
> ________________________________
> From: ligges at statistik.tu-dortmund.de <ligges at statistik.tu-dortmund.de>
> Sent: Tuesday, December 17, 2024 12:43:05 AM
> To: Aixiang Jiang <aijiang at bccrc.ca>
> Cc: CRAN-submissions at R-project.org <CRAN-submissions at R-project.org>
> Subject: [CRAN-pretest-archived] CRAN Submission NMRphasing 1.0.6
>
> CAUTION: EXTERNAL EMAIL. Verify both the sender's email and name. Avoid links/attachments unless expected. Report any suspicious message by forwarding it as an attachment to spammail at bccrc.ca
>
>
> Dear maintainer,
>
> package NMRphasing_1.0.6.tar.gz does not pass the incoming checks automatically, please see the following pre-tests (additional issue checks):
> Windows: <https://win-builder.r-project.org/incoming_pretest/NMRphasing_1.0.6_20241217_091411/Windows/00check.log>
> Status: OK
> Debian: <https://win-builder.r-project.org/incoming_pretest/NMRphasing_1.0.6_20241217_091411/Debian/00check.log>
> Status: OK
>
> Additional issues checked: <https://win-builder.r-project.org/incoming_pretest/NMRphasing_1.0.6_20241217_091411/specialChecks/>
> gcc-san: Status: 1 ERROR
>
> Last released version's CRAN status: OK: 13
> See: <https://CRAN.R-project.org/web/checks/check_results_NMRphasing.html>
>
> Last released version's additional issues:
> gcc-ASAN <https://www.stats.ox.ac.uk/pub/bdr/memtests/gcc-ASAN/NMRphasing>
>
> CRAN Web: <https://cran.r-project.org/package=NMRphasing>
>
> Please fix all problems and resubmit a fixed version via the webform.
> If you are not sure how to fix the problems shown, please ask for help on the R-package-devel mailing list:
> <https://stat.ethz.ch/mailman/listinfo/r-package-devel>
> If you are fairly certain the rejection is a false positive, please reply-all to this message and explain.
>
> More details are given in the directory:
> <https://win-builder.r-project.org/incoming_pretest/NMRphasing_1.0.6_20241217_091411/>
> The files will be removed after roughly 7 days.
>
> No strong reverse dependencies to be checked.
>
> Best regards,
> CRAN teams' auto-check service
>
> [[alternative HTML version deleted]]
>
>
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