I recently updated my FSA package and submitted it to CRAN, but it was rejected with errors on the pre-test. I tested the package, both before and now after submission, on my Windows machine (with R 3.4.1), on Travis-CI and AppVeyor, and on all three versions of R (old, current, and development) on WinBuilder. In all instances, no errors were returned. Furthermore, I cannot interpret the error messages returned from the CRAN pre-test file. From this, I have two questions. How can I locally reproduce the CRAN pre-test checks/errors so that I can troubleshoot the problem myself? Any suggestions for how to interpret the CRAN pre-test checks/errors? [For what it is worth, it feels like this error is related to the availability of nlme or lme4 (see the error at the bottom of the 64-bit examples file), but I trust CRAN more than myself in these matters.] The CRAN pre-test folder is at https://win-builder.r-project.org/incoming_pretest/170907_041001_FSA_0815/ with the errors shown in the log and the .Rout files in the examples/tests folder. My WinBuilder checks are at: Old-release -- https://win-builder.r-project.org/7i5svuyd2kP3/00check.log, current -- https://win-builder.r-project.org/vR33M8284Jbg/, devel - https://win-builder.r-project.org/XqHThgnnnvpv/00check.log If necessary, my package source code is at https://github.com/droglenc/FSA Thanks in advance for any help.
[R-pkg-devel] CRAN Submission Question (FSA)
4 messages · Thierry Onkelinx, Uwe Ligges, Derek Ogle
Dear Olek, One of the problems seems to be that lme4 (dependency of fishmethod) wasn't installed during the pretest. I have no idea why. Best regards, ir. Thierry Onkelinx Instituut voor natuur- en bosonderzoek / Research Institute for Nature and Forest team Biometrie & Kwaliteitszorg / team Biometrics & Quality Assurance Kliniekstraat 25 1070 Anderlecht Belgium To call in the statistician after the experiment is done may be no more than asking him to perform a post-mortem examination: he may be able to say what the experiment died of. ~ Sir Ronald Aylmer Fisher The plural of anecdote is not data. ~ Roger Brinner The combination of some data and an aching desire for an answer does not ensure that a reasonable answer can be extracted from a given body of data. ~ John Tukey 2017-09-07 18:00 GMT+02:00 Derek Ogle <DOgle at northland.edu>:
I recently updated my FSA package and submitted it to CRAN, but it was rejected with errors on the pre-test. I tested the package, both before and now after submission, on my Windows machine (with R 3.4.1), on Travis-CI and AppVeyor, and on all three versions of R (old, current, and development) on WinBuilder. In all instances, no errors were returned. Furthermore, I cannot interpret the error messages returned from the CRAN pre-test file. From this, I have two questions. How can I locally reproduce the CRAN pre-test checks/errors so that I can troubleshoot the problem myself? Any suggestions for how to interpret the CRAN pre-test checks/errors? [For what it is worth, it feels like this error is related to the availability of nlme or lme4 (see the error at the bottom of the 64-bit examples file), but I trust CRAN more than myself in these matters.] The CRAN pre-test folder is at https://win-builder.r-project. org/incoming_pretest/170907_041001_FSA_0815/ with the errors shown in the log and the .Rout files in the examples/tests folder. My WinBuilder checks are at: Old-release -- https://win-builder.r-project. org/7i5svuyd2kP3/00check.log, current -- https://win-builder.r-project. org/vR33M8284Jbg/, devel - https://win-builder.r-project. org/XqHThgnnnvpv/00check.log If necessary, my package source code is at https://github.com/droglenc/FSA Thanks in advance for any help.
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Looks like a race condition on the incominf check system. Please simply resubmit. If this happens again, please respond omn the auto generated message and we will take a look manually. Best, Uwe Ligges
On 07.09.2017 18:00, Derek Ogle wrote:
I recently updated my FSA package and submitted it to CRAN, but it was rejected with errors on the pre-test. I tested the package, both before and now after submission, on my Windows machine (with R 3.4.1), on Travis-CI and AppVeyor, and on all three versions of R (old, current, and development) on WinBuilder. In all instances, no errors were returned. Furthermore, I cannot interpret the error messages returned from the CRAN pre-test file. From this, I have two questions. How can I locally reproduce the CRAN pre-test checks/errors so that I can troubleshoot the problem myself? Any suggestions for how to interpret the CRAN pre-test checks/errors? [For what it is worth, it feels like this error is related to the availability of nlme or lme4 (see the error at the bottom of the 64-bit examples file), but I trust CRAN more than myself in these matters.] The CRAN pre-test folder is at https://win-builder.r-project.org/incoming_pretest/170907_041001_FSA_0815/ with the errors shown in the log and the .Rout files in the examples/tests folder. My WinBuilder checks are at: Old-release -- https://win-builder.r-project.org/7i5svuyd2kP3/00check.log, current -- https://win-builder.r-project.org/vR33M8284Jbg/, devel - https://win-builder.r-project.org/XqHThgnnnvpv/00check.log If necessary, my package source code is at https://github.com/droglenc/FSA Thanks in advance for any help.
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Just to close this "issue." I resubmitted as suggested and the package appears to have made it through to CRAN. Thank you Thierry and Uwe for your help. -----Original Message----- From: Uwe Ligges [mailto:ligges at statistik.tu-dortmund.de] Sent: Thursday, September 07, 2017 1:46 PM To: Derek Ogle <DOgle at northland.edu>; R-package-devel at r-project.org Subject: Re: [R-pkg-devel] CRAN Submission Question (FSA) Looks like a race condition on the incominf check system. Please simply resubmit. If this happens again, please respond omn the auto generated message and we will take a look manually. Best, Uwe Ligges
On 07.09.2017 18:00, Derek Ogle wrote:
I recently updated my FSA package and submitted it to CRAN, but it was rejected with errors on the pre-test. I tested the package, both before and now after submission, on my Windows machine (with R 3.4.1), on Travis-CI and AppVeyor, and on all three versions of R (old, current, and development) on WinBuilder. In all instances, no errors were returned. Furthermore, I cannot interpret the error messages returned from the CRAN pre-test file. From this, I have two questions. How can I locally reproduce the CRAN pre-test checks/errors so that I can troubleshoot the problem myself? Any suggestions for how to interpret the CRAN pre-test checks/errors? [For what it is worth, it feels like this error is related to the availability of nlme or lme4 (see the error at the bottom of the 64-bit examples file), but I trust CRAN more than myself in these matters.] The CRAN pre-test folder is at https://win-builder.r-project.org/incoming_pretest/170907_041001_FSA_0815/ with the errors shown in the log and the .Rout files in the examples/tests folder. My WinBuilder checks are at: Old-release -- https://win-builder.r-project.org/7i5svuyd2kP3/00check.log, current -- https://win-builder.r-project.org/vR33M8284Jbg/, devel - https://win-builder.r-project.org/XqHThgnnnvpv/00check.log If necessary, my package source code is at https://github.com/droglenc/FSA Thanks in advance for any help.
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