Hi all, *[Issue 1]* This is the first time I have encountered this, and I have no idea what's going on. I really appreciate anyone's help on this. My package: https://cran.r-project.org/package=DataExplorer My story: - *[Jan 01]* - I plan to release the latest version to CRAN. I ran all checks (including win-builder through *devtools::build_win()*) on my package, everything is OK, so I submitted it. - The URL for win-builder has expired, but in case you can find the check log: https://win-builder.r-project.org/D52z9NcU7633 - AppVeyor build log: https://ci.appveyor.com/project/boxuancui/dataexplorer/build/master.36 - Travis CI build log: https://travis-ci.org/boxuancui/DataExplorer/builds/323730230 - *[Jan 03]* - I was told that I need to update my MIT license file, since I made some changes there. I did as told and re-submit the package. I didn't change anything. - *[Jan 03 (later of the day)]* - My package is failing example checks on arch 'i386' for Windows, according to https://win-builder.r-project.org/incoming_pretest/180103_161227_DataExplorer_050/00check.log - Note the example was failing for *split_columns()*. - *[Jan 05]* - I saw the Email and did another *devtools::build_win()* with no changes at all. - I received the same error, but on another function, i.e., *set_missing()*. - The check log is here: https://win-builder.r-project.org/9bKr71mwef11/00check.log - *[Jan 05]* - After some investigation, I believe it is due to dependency versions, so I update DESCRIPTION with latest version for all, including R (was 3.3.0). - This time the check log is showing a warning: *checking DESCRIPTION meta-information ... WARNING Dependence on R version '3.4.3' not with patchlevel 0*. - The check log is here: https://win-builder.r-project.org/5Px18P21h44a/00check.log Has anyone encountered this issue before? *[Issue 2]* Does anyone know how to remove these warnings for vignettes? https://cran.r-project.org/web/checks/check_results_DataExplorer.html They happen on the following systems: - r-patched-solaris-x86 - r-release-osx-x86_64 - r-oldrel-osx-x86_64 Warning message: *Warning in engine$weave(file, quiet = quiet, encoding = enc) :* * Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.* * Warning in normalizePath(f2) :* * path[1]="./webshot3eaf50bf136e.png": No such file or directory* * Warning in file(con, "rb") :* * cannot open file './webshot3eaf50bf136e.png': No such file or directory* * Quitting from lines 57-68 (dataexplorer-intro.Rmd) * * Error: processing vignette 'dataexplorer-intro.Rmd' failed with diagnostics:* * cannot open the connection* * Execution halted * After searching for the same warnings online, I found that vignettes (from other pakcages) that loads JavaScript files tend to have these. Is there a way to fix this? Thank you very much for your time! Best, Boxuan (Bo)
[R-pkg-devel] Help with R check
3 messages · Boxuan Cui, Uwe Ligges
On 06.01.2018 18:36, Boxuan Cui wrote:
Hi all, *[Issue 1]* This is the first time I have encountered this, and I have no idea what's going on. I really appreciate anyone's help on this. My package: https://cran.r-project.org/package=DataExplorer My story: - *[Jan 01]* - I plan to release the latest version to CRAN. I ran all checks (including win-builder through *devtools::build_win()*) on my package, everything is OK, so I submitted it. - The URL for win-builder has expired, but in case you can find the check log: https://win-builder.r-project.org/D52z9NcU7633 - AppVeyor build log: https://ci.appveyor.com/project/boxuancui/dataexplorer/build/master.36 - Travis CI build log: https://travis-ci.org/boxuancui/DataExplorer/builds/323730230 - *[Jan 03]* - I was told that I need to update my MIT license file, since I made some changes there. I did as told and re-submit the package. I didn't change anything. - *[Jan 03 (later of the day)]* - My package is failing example checks on arch 'i386' for Windows, according to https://win-builder.r-project.org/incoming_pretest/180103_161227_DataExplorer_050/00check.log - Note the example was failing for *split_columns()*. - *[Jan 05]* - I saw the Email and did another *devtools::build_win()* with no changes at all. - I received the same error, but on another function, i.e., *set_missing()*. - The check log is here: https://win-builder.r-project.org/9bKr71mwef11/00check.log - *[Jan 05]* - After some investigation, I believe it is due to dependency versions, so I update DESCRIPTION with latest version for all, including R (was 3.3.0).
No, not the reason: You checked with R-devel, hence the version requirement is not the reason for the problems you reported above.
- This time the check log is showing a warning: *checking DESCRIPTION
meta-information ... WARNING Dependence on R version '3.4.3' not with
patchlevel 0*.
- The check log is here:
https://win-builder.r-project.org/5Px18P21h44a/00check.log
Has anyone encountered this issue before?
In order to get consistent binary repositories etc., we ask you to find proper vresion requirement with patchlevel 0, i.e. 3.3.0 or 3.4.0 if applicable. Best, Uwe Ligges
*[Issue 2]* Does anyone know how to remove these warnings for vignettes? https://cran.r-project.org/web/checks/check_results_DataExplorer.html They happen on the following systems: - r-patched-solaris-x86 - r-release-osx-x86_64 - r-oldrel-osx-x86_64 Warning message: *Warning in engine$weave(file, quiet = quiet, encoding = enc) :* * Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.* * Warning in normalizePath(f2) :* * path[1]="./webshot3eaf50bf136e.png": No such file or directory* * Warning in file(con, "rb") :* * cannot open file './webshot3eaf50bf136e.png': No such file or directory* * Quitting from lines 57-68 (dataexplorer-intro.Rmd) * * Error: processing vignette 'dataexplorer-intro.Rmd' failed with diagnostics:* * cannot open the connection* * Execution halted * After searching for the same warnings online, I found that vignettes (from other pakcages) that loads JavaScript files tend to have these. Is there a way to fix this? Thank you very much for your time! Best, Boxuan (Bo) [[alternative HTML version deleted]]
______________________________________________ R-package-devel at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
I made some updates and ran a couple of additional checks, e.g., R CMD check --as-cran, win-builder, AppVeyor, Travis. Everything is giving me status OK. However, when I try to resubmit my package, I get another ERROR running examples for arch 'i386': https://win-builder.r-project.org/incoming_pretest/180107_170932_DataExplorer_050/00check.log Is there a difference in configuration for the "incoming_pretest" check? And is there a way to re-produce this error other than trying to release it? Apologies if I am missing something obvious, and thank you! Best, Boxuan (Bo) On Sat, Jan 6, 2018 at 5:11 PM, Uwe Ligges <ligges at statistik.tu-dortmund.de> wrote:
On 06.01.2018 18:36, Boxuan Cui wrote:
Hi all, *[Issue 1]* This is the first time I have encountered this, and I have no idea what's going on. I really appreciate anyone's help on this. My package: https://cran.r-project.org/package=DataExplorer My story: - *[Jan 01]* - I plan to release the latest version to CRAN. I ran all checks (including win-builder through *devtools::build_win()*) on my package, everything is OK, so I submitted it. - The URL for win-builder has expired, but in case you can find the check log: https://win-builder.r-project.org/D52z9NcU7633 - AppVeyor build log: https://ci.appveyor.com/project/boxuancui/dataexplorer/ build/master.36 - Travis CI build log: https://travis-ci.org/boxuancui/DataExplorer/builds/323730230 - *[Jan 03]* - I was told that I need to update my MIT license file, since I made some changes there. I did as told and re-submit the package. I didn't change anything. - *[Jan 03 (later of the day)]* - My package is failing example checks on arch 'i386' for Windows, according to https://win-builder.r-project.org/incoming_pretest/ 180103_161227_DataExplorer_050/00check.log - Note the example was failing for *split_columns()*. - *[Jan 05]* - I saw the Email and did another *devtools::build_win()* with no changes at all. - I received the same error, but on another function, i.e., *set_missing()*. - The check log is here: https://win-builder.r-project.org/9bKr71mwef11/00check.log - *[Jan 05]* - After some investigation, I believe it is due to dependency versions, so I update DESCRIPTION with latest version for all, including R (was 3.3.0).
No, not the reason: You checked with R-devel, hence the version
requirement is not the reason for the problems you reported above.
- This time the check log is showing a warning: *checking
DESCRIPTION
meta-information ... WARNING Dependence on R version '3.4.3' not
with
patchlevel 0*.
- The check log is here:
https://win-builder.r-project.org/5Px18P21h44a/00check.log
Has anyone encountered this issue before?
In order to get consistent binary repositories etc., we ask you to find proper vresion requirement with patchlevel 0, i.e. 3.3.0 or 3.4.0 if applicable. Best, Uwe Ligges *[Issue 2]*
Does anyone know how to remove these warnings for vignettes? https://cran.r-project.org/web/checks/check_results_DataExplorer.html They happen on the following systems: - r-patched-solaris-x86 - r-release-osx-x86_64 - r-oldrel-osx-x86_64 Warning message: *Warning in engine$weave(file, quiet = quiet, encoding = enc) :* * Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.* * Warning in normalizePath(f2) :* * path[1]="./webshot3eaf50bf136e.png": No such file or directory* * Warning in file(con, "rb") :* * cannot open file './webshot3eaf50bf136e.png': No such file or directory* * Quitting from lines 57-68 (dataexplorer-intro.Rmd) * * Error: processing vignette 'dataexplorer-intro.Rmd' failed with diagnostics:* * cannot open the connection* * Execution halted * After searching for the same warnings online, I found that vignettes (from other pakcages) that loads JavaScript files tend to have these. Is there a way to fix this? Thank you very much for your time! Best, Boxuan (Bo) [[alternative HTML version deleted]]
______________________________________________ R-package-devel at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel