Dear All,
I tried unsuccessfully to upload a package named RJafroc to CRAN. On my OSX
machine it passes R CMD Check with no errors, warnings or notes. However, I
get the following output from CRAN, from which I cannot tell which function
is causing the error (I am truncating the intermediate lines, which appear
to be the opening screen upon starting R, with ellipses; the full output
produced by the CRAN pre-test is attached):
*** running examples for arch 'x64' ... ERROR*
*Running examples in 'RJafroc-Ex.R' failed*
*The error occurred in:*
*R Under development (unstable) (2018-02-01 r74194) -- "Unsuffered
Consequences"*
*Copyright (C) 2018 The R Foundation for Statistical Computing*
*Platform: x86_64-w64-mingw32/x64 (64-bit)*
*R is free software and comes with ABSOLUTELY NO WARRANTY.*
*You are welcome to redistribute it under certain conditions*
*...*
*...*
*Type 'q()' to quit R.*
*> pkgname <- "RJafroc"*
*> source(file.path(R.home("share"), "R", "examples-header.R"))*
Thanking you in advance for any help rendered,
Sincerely,
Dev
--
Dev Chakraborty, PhD
Professor of Radiology, retired
[R-pkg-devel] Help with correcting error in package
5 messages · Dev Chakraborty, Joshua Ulrich, Roy Mendelssohn - NOAA Federal
On Sat, Feb 3, 2018 at 11:44 AM, Dev Chakraborty <dpc10ster at gmail.com> wrote:
Dear All, I tried unsuccessfully to upload a package named RJafroc to CRAN. On my OSX machine it passes R CMD Check with no errors, warnings or notes. However, I get the following output from CRAN, from which I cannot tell which function is causing the error (I am truncating the intermediate lines, which appear to be the opening screen upon starting R, with ellipses; the full output produced by the CRAN pre-test is attached):
Submit your package to http://win-builder.r-project.org. That will provide you access to all the output in the Rcheck.RJafroc directory. Also note that the "Confirmation" step of the submission process suggests, "You could [run R CMD check] using the win-builder service at http://win-builder.r-project.org". And the CRAN Repository Policy says, "It should be normal for those without Windows machines of their own to use the winbuilder service to check a package before submission." You could also use https://builder.r-hub.io/. Both are great resources for the community.
*** running examples for arch 'x64' ... ERROR*
*Running examples in 'RJafroc-Ex.R' failed*
*The error occurred in:*
*R Under development (unstable) (2018-02-01 r74194) -- "Unsuffered
Consequences"*
*Copyright (C) 2018 The R Foundation for Statistical Computing*
*Platform: x86_64-w64-mingw32/x64 (64-bit)*
*R is free software and comes with ABSOLUTELY NO WARRANTY.*
*You are welcome to redistribute it under certain conditions*
*...*
*...*
*Type 'q()' to quit R.*
*> pkgname <- "RJafroc"*
*> source(file.path(R.home("share"), "R", "examples-header.R"))*
Thanking you in advance for any help rendered,
Sincerely,
Dev
--
Dev Chakraborty, PhD
Professor of Radiology, retired
______________________________________________ R-package-devel at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
Joshua Ulrich | about.me/joshuaulrich FOSS Trading | www.fosstrading.com R/Finance 2018 | www.rinfinance.com
I would add to make certain you submit to both "R-release" and "R-devel" in particular since the error you are getting is from "R-devel". If you install the "devtools" package, that can do the submission to both for you. There has been previous discussion on this list that "R-devel" does not load a complete distribution, therefore they may be different requirements on what is "Imported" or "Suggested". -Roy
On Feb 3, 2018, at 10:16 AM, Joshua Ulrich <josh.m.ulrich at gmail.com> wrote: On Sat, Feb 3, 2018 at 11:44 AM, Dev Chakraborty <dpc10ster at gmail.com> wrote:
Dear All, I tried unsuccessfully to upload a package named RJafroc to CRAN. On my OSX machine it passes R CMD Check with no errors, warnings or notes. However, I get the following output from CRAN, from which I cannot tell which function is causing the error (I am truncating the intermediate lines, which appear to be the opening screen upon starting R, with ellipses; the full output produced by the CRAN pre-test is attached):
Submit your package to http://win-builder.r-project.org. That will provide you access to all the output in the Rcheck.RJafroc directory. Also note that the "Confirmation" step of the submission process suggests, "You could [run R CMD check] using the win-builder service at http://win-builder.r-project.org". And the CRAN Repository Policy says, "It should be normal for those without Windows machines of their own to use the winbuilder service to check a package before submission." You could also use https://builder.r-hub.io/. Both are great resources for the community.
*** running examples for arch 'x64' ... ERROR*
*Running examples in 'RJafroc-Ex.R' failed*
*The error occurred in:*
*R Under development (unstable) (2018-02-01 r74194) -- "Unsuffered
Consequences"*
*Copyright (C) 2018 The R Foundation for Statistical Computing*
*Platform: x86_64-w64-mingw32/x64 (64-bit)*
*R is free software and comes with ABSOLUTELY NO WARRANTY.*
*You are welcome to redistribute it under certain conditions*
*...*
*...*
*Type 'q()' to quit R.*
*> pkgname <- "RJafroc"*
*> source(file.path(R.home("share"), "R", "examples-header.R"))*
Thanking you in advance for any help rendered,
Sincerely,
Dev
--
Dev Chakraborty, PhD
Professor of Radiology, retired
______________________________________________ R-package-devel at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
-- Joshua Ulrich | about.me/joshuaulrich FOSS Trading | www.fosstrading.com R/Finance 2018 | www.rinfinance.com
______________________________________________ R-package-devel at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
********************** "The contents of this message do not reflect any position of the U.S. Government or NOAA." ********************** Roy Mendelssohn Supervisory Operations Research Analyst NOAA/NMFS Environmental Research Division Southwest Fisheries Science Center ***Note new street address*** 110 McAllister Way Santa Cruz, CA 95060 Phone: (831)-420-3666 Fax: (831) 420-3980 e-mail: Roy.Mendelssohn at noaa.gov www: http://www.pfeg.noaa.gov/ "Old age and treachery will overcome youth and skill." "From those who have been given much, much will be expected" "the arc of the moral universe is long, but it bends toward justice" -MLK Jr.
Thank you; this is most helpful; Dev On Sat, Feb 3, 2018 at 1:16 PM, Joshua Ulrich <josh.m.ulrich at gmail.com> wrote:
On Sat, Feb 3, 2018 at 11:44 AM, Dev Chakraborty <dpc10ster at gmail.com> wrote:
Dear All, I tried unsuccessfully to upload a package named RJafroc to CRAN. On my
OSX
machine it passes R CMD Check with no errors, warnings or notes.
However, I
get the following output from CRAN, from which I cannot tell which
function
is causing the error (I am truncating the intermediate lines, which
appear
to be the opening screen upon starting R, with ellipses; the full output produced by the CRAN pre-test is attached):
Submit your package to http://win-builder.r-project.org. That will provide you access to all the output in the Rcheck.RJafroc directory. Also note that the "Confirmation" step of the submission process suggests, "You could [run R CMD check] using the win-builder service at http://win-builder.r-project.org". And the CRAN Repository Policy says, "It should be normal for those without Windows machines of their own to use the winbuilder service to check a package before submission." You could also use https://builder.r-hub.io/. Both are great resources for the community.
*** running examples for arch 'x64' ... ERROR*
*Running examples in 'RJafroc-Ex.R' failed*
*The error occurred in:*
*R Under development (unstable) (2018-02-01 r74194) -- "Unsuffered
Consequences"*
*Copyright (C) 2018 The R Foundation for Statistical Computing*
*Platform: x86_64-w64-mingw32/x64 (64-bit)*
*R is free software and comes with ABSOLUTELY NO WARRANTY.*
*You are welcome to redistribute it under certain conditions*
*...*
*...*
*Type 'q()' to quit R.*
*> pkgname <- "RJafroc"*
*> source(file.path(R.home("share"), "R", "examples-header.R"))*
Thanking you in advance for any help rendered,
Sincerely,
Dev
--
Dev Chakraborty, PhD
Professor of Radiology, retired
______________________________________________ R-package-devel at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
-- Joshua Ulrich | about.me/joshuaulrich FOSS Trading | www.fosstrading.com R/Finance 2018 | www.rinfinance.com
Dev Chakraborty, PhD Professor of Radiology retired CEO, ExpertCAD Analytics LLC 412-480-7318 (cell) ?(412) 427-5085? (alt. cell) 412-349-5305 (land line) *Book website:* https://www.crcpress.com/9781482214840 *Online supplementary material website:* https://bitbucket.org/dpc10ster/onlinebookk21778 <https://www.crcpress.com/9781482214840> *CAD Project website:* www.expertcadanalytics.com *JAFROC website* www.devchakraborty.com [[alternative HTML version deleted]]
Thank you; I appreciate the helpful response; dev On Sat, Feb 3, 2018 at 1:23 PM, Roy Mendelssohn - NOAA Federal <
roy.mendelssohn at noaa.gov> wrote:
I would add to make certain you submit to both "R-release" and "R-devel" in particular since the error you are getting is from "R-devel". If you install the "devtools" package, that can do the submission to both for you. There has been previous discussion on this list that "R-devel" does not load a complete distribution, therefore they may be different requirements on what is "Imported" or "Suggested". -Roy
On Feb 3, 2018, at 10:16 AM, Joshua Ulrich <josh.m.ulrich at gmail.com>
wrote:
On Sat, Feb 3, 2018 at 11:44 AM, Dev Chakraborty <dpc10ster at gmail.com>
wrote:
Dear All, I tried unsuccessfully to upload a package named RJafroc to CRAN. On my
OSX
machine it passes R CMD Check with no errors, warnings or notes.
However, I
get the following output from CRAN, from which I cannot tell which
function
is causing the error (I am truncating the intermediate lines, which
appear
to be the opening screen upon starting R, with ellipses; the full output produced by the CRAN pre-test is attached):
Submit your package to http://win-builder.r-project.org. That will provide you access to all the output in the Rcheck.RJafroc directory. Also note that the "Confirmation" step of the submission process suggests, "You could [run R CMD check] using the win-builder service at http://win-builder.r-project.org". And the CRAN Repository Policy says, "It should be normal for those without Windows machines of their own to use the winbuilder service to check a package before submission." You could also use https://builder.r-hub.io/. Both are great resources for the community.
*** running examples for arch 'x64' ... ERROR*
*Running examples in 'RJafroc-Ex.R' failed*
*The error occurred in:*
*R Under development (unstable) (2018-02-01 r74194) -- "Unsuffered
Consequences"*
*Copyright (C) 2018 The R Foundation for Statistical Computing*
*Platform: x86_64-w64-mingw32/x64 (64-bit)*
*R is free software and comes with ABSOLUTELY NO WARRANTY.*
*You are welcome to redistribute it under certain conditions*
*...*
*...*
*Type 'q()' to quit R.*
*> pkgname <- "RJafroc"*
*> source(file.path(R.home("share"), "R", "examples-header.R"))*
Thanking you in advance for any help rendered,
Sincerely,
Dev
--
Dev Chakraborty, PhD
Professor of Radiology, retired
______________________________________________ R-package-devel at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
-- Joshua Ulrich | about.me/joshuaulrich FOSS Trading | www.fosstrading.com R/Finance 2018 | www.rinfinance.com
______________________________________________ R-package-devel at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
********************** "The contents of this message do not reflect any position of the U.S. Government or NOAA." ********************** Roy Mendelssohn Supervisory Operations Research Analyst NOAA/NMFS Environmental Research Division Southwest Fisheries Science Center ***Note new street address*** 110 McAllister Way Santa Cruz, CA 95060 Phone: (831)-420-3666 Fax: (831) 420-3980 e-mail: Roy.Mendelssohn at noaa.gov www: http://www.pfeg.noaa.gov/ "Old age and treachery will overcome youth and skill." "From those who have been given much, much will be expected" "the arc of the moral universe is long, but it bends toward justice" -MLK Jr.
Dev Chakraborty, PhD Professor of Radiology retired CEO, ExpertCAD Analytics LLC 412-480-7318 (cell) ?(412) 427-5085? (alt. cell) 412-349-5305 (land line) *Book website:* https://www.crcpress.com/9781482214840 *Online supplementary material website:* https://bitbucket.org/dpc10ster/onlinebookk21778 <https://www.crcpress.com/9781482214840> *CAD Project website:* www.expertcadanalytics.com *JAFROC website* www.devchakraborty.com [[alternative HTML version deleted]]