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[R-pkg-devel] bioconductor package required but not available

2 messages · Jendoubi Bedhiafi, Takoua, Martin Morgan

#
Hi all,

All checks for my updated package seem to be all fine except for  r-release-macos-x86_64 <https://cran.r-project.org/web/checks/check_flavors.html#r-release-macos-x86_64> .
KEGGgraph a bio conductor package is required for my package to run but is not available on the platform.

It is however available on the devel version.
Full log below:
https://www.r-project.org/nosvn/R.check/r-release-macos-x86_64/iCARH-00check.html

Does this mean the package might be removed from CRAN?

Thanks in advance,
bw,
________________________________
Dr. Takoua Jendoubi, PhD, MSc, PGCert ULT, FHEA
Strategic Teaching Fellow in Statistics

Statistics section | Department of Mathematics |
Imperial College London | Room 533 |
South Kensington Campus | London |
SW7 2AZ |
#
Here is the build report for KEGGgraph

http://bioconductor.org/packages/release/bioc/html/KEGGgraph.html

where it builds, and is available, across all platforms. This does not seem to be a Bioconductor problem, but rather a CRAN configuration issue.

Martin Morgan
Bioconductor

?On 9/1/20, 12:05 PM, "R-package-devel on behalf of Jendoubi Bedhiafi, Takoua" <r-package-devel-bounces at r-project.org on behalf of t.jendoubi14 at imperial.ac.uk> wrote:

    Hi all,

    All checks for my updated package seem to be all fine except for  r-release-macos-x86_64 <https://cran.r-project.org/web/checks/check_flavors.html#r-release-macos-x86_64> .
    KEGGgraph a bio conductor package is required for my package to run but is not available on the platform.

    It is however available on the devel version.
    Full log below:
    https://www.r-project.org/nosvn/R.check/r-release-macos-x86_64/iCARH-00check.html

    Does this mean the package might be removed from CRAN?

    Thanks in advance,
    bw,
    ________________________________
    Dr. Takoua Jendoubi, PhD, MSc, PGCert ULT, FHEA
    Strategic Teaching Fellow in Statistics

    Statistics section | Department of Mathematics |
    Imperial College London | Room 533 |
    South Kensington Campus | London |
    SW7 2AZ |



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