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[R-pkg-devel] Error in pkg Check Results

3 messages · Daniel Lüdecke, Uwe Ligges

Original
Daniel Lüdecke
# 
Before submitting a package-update, I visit the check-results-page, as 
requested by CRAN. For my sjstats-package, there is an error on 
r-patched-solaris for package version 0.8.0:

https://www.r-project.org/nosvn/R.check/r-patched-solaris-x86/sjstats-00check.html

it says:

Waiting for profiling to be done...

  *** caught segfault ***
address f, cause 'memory not mapped'

Is this an issue with R on linux, or can this issue be solved by me as 
package-maintainer?

Best
Daniel
--

_____________________________________________________________________

Universit?tsklinikum Hamburg-Eppendorf; K?rperschaft des ?ffentlichen Rechts; Gerichtsstand: Hamburg | www.uke.de
Vorstandsmitglieder: Prof. Dr. Burkhard G?ke (Vorsitzender), Prof. Dr. Dr. Uwe Koch-Gromus, Joachim Pr?l?, Rainer Schoppik
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Uwe Ligges
#
On 06.02.2017 12:09, Daniel L?decke wrote:
Well, this is on Solaris, not Linux, most likely it is an issue on your end.

Best,
Uwe Ligges
Daniel Lüdecke
# 
Yes, I recognized this just after sending the mail I'm just curious why 
this does only happen on Solaris, and not other machines. According to 
the traceback, this error seems to occur when computing CI for glm:

Traceback:
  1: glm.fit(x = Xi, y = Y, weights = W, etastart = LP, offset = o, 
family = fam, control = fitted$control)
  2: profile.glm(object, which = parm, alpha = (1 - level)/4, trace = trace)
  3: profile(object, which = parm, alpha = (1 - level)/4, trace = trace)
  4: confint.glm(fit)
  5: stats::confint(fit)
  6: odds_to_rr(fit)

At a first look, this seems to be something I can't do much about, but I 
want to be sure to do my best to avoid errors on the various R OS platforms.

Best
Daniel

Am 06.02.2017 um 12:19 schrieb Uwe Ligges: