rJava in R 2.8.1 on Ubuntu 8.10
Hi all I have problems installing rJava on my system. ######## My system:
R.version # at R prompt
platform x86_64-pc-linux-gnu arch x86_64 os linux-gnu system x86_64, linux-gnu status major 2 minor 8.1 year 2008 month 12 day 22 svn rev 47281 language R version.string R version 2.8.1 (2008-12-22)
java -version # at terminal prompt
java version "1.6.0_0" IcedTea6 1.3.1 (6b12-0ubuntu6) Runtime Environment (build 1.6.0_0-b12) OpenJDK 64-Bit Server VM (build 1.6.0_0-b12, mixed mode) stgries at stgries-acer:~$ on Ubuntu 8.10 (Kernel 2.6.27-9) on an AMD Phenom Triple-Core The problem arises here: java libs : '-L/usr/lib/jvm/java-6-openjdk/jre/lib/amd64/server -L/usr/lib/jvm/java-6-openjdk/jre/lib/amd64 -L/usr/lib/jvm/java-6-openjdk/jre/../lib/amd64 -L -L/usr/java/packages/lib/amd64 -L/usr/lib64 -L/lib64 -L/lib -L/usr/lib -ljvm' configure: error: Java Development Kit (JDK) is missing or not registered in R Make sure R is configured with full Java support (including JDK). Run R CMD javareconf as root to add Java support to R. When I then do that
sudo R CMD javareconf # at terminal
I get this: Updating Java configuration in /etc/R Done. However, it still doesn't work, returning the same crap as before. Also, when I try
R CMD javareconf -e # at terminal
I just get shift: 57: can't shift that many Any hints would be much appreciated STG