Looks like you will need to update packages in a specific order. Since
spatial depends on date, date needs to updated first.
update.packages("date")
Then try again and see what it tells you next.
It's a bit of a pain but will eventually work. The other option is to
dump the list of current packages. Uninstall the old and try to install
from the list.
Thanks,
Alex
On 04/21/2014 12:23 PM, claude krzisch wrote:
Hi, Thank you for your response. It was one of the first things I did. However, it doesn't work. The error messages are (in french) /Les packages source t?l?charg?s sont dans// // '/tmp/Rtmp4IaeBv/downloaded_packages'// //essai de l'URL 'http://cran.irsn.fr/src/contrib/spatial_7.3-8.tar.gz'// //Content type 'application/x-gzip' length 43593 bytes (42 Kb)// //URL ouverte// //==================================================// //downloaded 42 Kb// // //Erreur : package 'date' was built before R 3.0.0: please re-install it// //Ex?cution arr?t?e// // //Les packages source t?l?charg?s sont dans// // '/tmp/Rtmp4IaeBv/downloaded_packages'// //mise ? jour de la liste HTML des packages dans '.Library'// //Making 'packages.html' ... Termin?.// //Il y a eu 50 avis ou plus (utilisez warnings() pour voir les 50 premiers)// //> warnings()// //Messages d'avis :// //1: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'Ecfun' a eu un statut de sortie non nul// //2: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'BH' a eu un statut de sortie non nul// //3: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'FNN' a eu un statut de sortie non nul// //4: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'lava' a eu un statut de sortie non nul// //5: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'ape' a eu un statut de sortie non nul// //6: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'clue' a eu un statut de sortie non nul// //7: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'date' a eu un statut de sortie non nul// //8: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'deldir' a eu un statut de sortie non nul// //9: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'e1071' a eu un statut de sortie non nul// //10: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'effects' a eu un statut de sortie non nul// //11: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'energy' a eu un statut de sortie non nul// //12: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'evaluate' a eu un statut de sortie non nul// //13: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'expm' a eu un statut de sortie non nul// //14: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'gam' a eu un statut de sortie non nul// //15: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'geoRglm' a eu un statut de sortie non nul// //16: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'gridBase' a eu un statut de sortie non nul// //17: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'gss' a eu un statut de sortie non nul// //18: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'gtools' a eu un statut de sortie non nul// //19: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'gvlma' a eu un statut de sortie non nul// //20: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'hexbin' a eu un statut de sortie non nul// //21: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'HH' a eu un statut de sortie non nul// //22: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'igraph' a eu un statut de sortie non nul// //23: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'igraphdata' a eu un statut de sortie non nul// //24: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'iterators' a eu un statut de sortie non nul// //25: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'longitudinalData' a eu un statut de sortie non nul// //26: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'mapproj' a eu un statut de sortie non nul// //27: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'markdown' a eu un statut de sortie non nul// //28: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'MatrixModels' a eu un statut de sortie non nul// //29: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'mice' a eu un statut de sortie non nul// //30: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'oz' a eu un statut de sortie non nul// //31: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'pastecs' a eu un statut de sortie non nul// //32: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'permute' a eu un statut de sortie non nul// //33: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'plotrix' a eu un statut de sortie non nul// //34: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'plyr' a eu un statut de sortie non nul// //35: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'polynom' a eu un statut de sortie non nul// //36: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'proxy' a eu un statut de sortie non nul// //37: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'psych' a eu un statut de sortie non nul// //38: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'qcc' a eu un statut de sortie non nul// //39: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'rbounds' a eu un statut de sortie non nul// //40: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'Rcsdp' a eu un statut de sortie non nul// //41: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'scatterplot3d' a eu un statut de sortie non nul// //42: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'seriation' a eu un statut de sortie non nul// //43: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'sfsmisc' a eu un statut de sortie non nul// //44: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'shape' a eu un statut de sortie non nul// //45: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'slam' a eu un statut de sortie non nul// //46: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'sm' a eu un statut de sortie non nul// //47: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'sp' a eu un statut de sortie non nul// //48: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'statmod' a eu un statut de sortie non nul// //49: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'survival' a eu un statut de sortie non nul// //50: In install.packages(update[instlib == l, "Package"], l, ... :// // l'installation du package 'svGUI' a eu un statut de sortie non nul/ ... Another idea Thank you so much CK Le 21/04/2014 02:14, Alex Mandel a ?crit :
Open an R session and run update.packages() It will pull down and recompile whatever packages you have installed. Thanks, Alex On 04/20/2014 02:50 PM, claude krzisch wrote:
Hi I work with Ubuntu (now trusty) and I have a problem related, I presume, to the upgrade of R : I am unable to download some packages I relied heavily on previously as "date","survival" ... I tried to upgrade my packages without any success always with the same message : the package has been compiled before R 3.0.3, please recompile it. It is the first time that I have this type of problem and I don't know how to respond to it. Must I download the source package and compile it ? And how may I do it ? Thank you for your help CK Le 18/04/2014 21:54, Dirk Eddelbuettel a ?crit :
On 18 April 2014 at 16:39, Martin Bel wrote: | I've tried a few different mirrors before, including the rstudio one. | To be sure i've tried again with the one you provided, but didn't work. We can't really help you at the granularity of "didn't work": What did you try? How did it fail? What were the errors? Maybe read some of the HOWTOs on the web about 'how to ask a good question' as eg this classic variant: http://www.catb.org/esr/faqs/smart-questions.html | I've found this other method, that worked. I guess it's not the official one, | right? | | | sudo add-apt-repository ppa:marutter/rrutter Yes that is a different repository from the CRAN repository. They are related though. I honestly do not know what your question is. Thousands of people _use_ the CRAN Ubuntu repo happily. Maybe you just need to re-read the README... Good luck, Dirk
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