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Upgrade from 2.11.1 to 2.14.2 options?
4 messages · Jim Armstrong, Johannes Ranke, Mathieu Basille
Hi Jim, Seems you need some pinning. What's the result of: apt-cache policy r-base ? Mathieu. Le 13/03/2012 17:57, Jim Armstrong a ?crit :
Linux kernel 2.6.18-2-pve Proxmox vm. debian_version 6.0.4 Squeeze sessionInfo() R version 2.11.1 (2010-05-31) x86_64-pc-linux-gnu locale: C New to R, new to Debian. I'm trying to upgrade from 2.11.1 to 2.14 following the steps outlined in the doc below that I found on the link. http://www.r-project.org/ - DEBIAN PACKAGES OF R SOFTWARE I added this line to the sources.list file it's my closest mirror. deb-src http://cran.wustl.edu/bin/linux/debian squeeze-cran/ Ran apt-get update and then apt-get install r-base r-base-dev No errors returned seemed to run clean. Ran sessionInfo() from within R and it returns 2.11.1 Am I doing something wrong? Do I need to take a different approach? I have this link but I'm not sure of what I need off of it. If I do need to pull something from it. Index of /bin/linux/debian/squeeze-cran Thanks For a backport of the latest R release to squeeze, simply add something like deb http://<favorite-cran-mirror>/ bin/linux/debian squeeze-cran/ to the file /etc/apt/sources.list on your computer and install as usual. Note that you need to substitute<favorite-cran-mirror> by one of the mirror URLs listed in http://cran.r-project.org/mirrors.html There are binaries for the i386 and amd64 architectures. You can use the source packages from deb-src http://<favorite-cran-mirror>/bin/linux/debian squeeze-cran/ to compile binaries for other platforms. With an appropriate entry in /etc/apt/sources.list, the newest R release can be installed using a command sequence like apt-get update apt-get install r-base r-base-dev [[alternative HTML version deleted]]
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~$ whoami Mathieu Basille, Post-Doc ~$ locate Laboratoire d'?cologie Comportementale et de Conservation de la Faune + Centre d'?tude de la For?t D?partement de Biologie Universit? Laval, Qu?bec ~$ info http://ase-research.org/basille ~$ fortune ``If you can't win by reason, go for volume.'' Calvin, by Bill Watterson.
Jim,
I added this line to the sources.list file it's my closest mirror. deb-src http://cran.wustl.edu/bin/linux/debian squeeze-cran/
In this line, change "deb-src" to "deb" and run apt-get update and apt-get install r-base r-base-dev You only activated the source package repository, but you only need the repository of compiled packages, unless you use an architecture other than i386 or amd64. Kind regards, Johannes
Ran apt-get update and then apt-get install r-base r-base-dev
No errors returned seemed to run clean.
Ran sessionInfo() from within R and it returns 2.11.1
Am I doing something wrong?
Do I need to take a different approach?
I have this link but I'm not sure of what I need off of it. If I do need to
pull something from it.
Index of /bin/linux/debian/squeeze-cran
Thanks
For a backport of the latest R release to squeeze, simply add something
like
deb http://<favorite-cran-mirror>/
bin/linux/debian squeeze-cran/
to the file /etc/apt/sources.list on your computer and install as
usual. Note that you need to substitute <favorite-cran-mirror> by one of
the
mirror URLs listed in
http://cran.r-project.org/mirrors.html
There are binaries for the i386 and amd64 architectures. You
can use the source packages from
deb-src http://<favorite-cran-mirror>/bin/linux/debian squeeze-cran/
to compile binaries for other platforms.
With an appropriate entry in /etc/apt/sources.list, the newest R release
can be
installed using a command sequence like
apt-get update
apt-get install r-base r-base-dev
[[alternative HTML version deleted]]
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Oh, Johannes is right, I didn't see that one. Forget about the pinning then (well, it can be useful, but you probably don't need it. To give you an idea: http://jaqque.sbih.org/kplug/apt-pinning.html). apt-cache policy gives you the status of the package of interest. From yours, it's clear that you didn't have the repository activated. Mathieu. Le 14/03/2012 02:41, jranke at uni-bremen.de a ?crit :
Jim,
I added this line to the sources.list file it's my closest mirror. deb-src http://cran.wustl.edu/bin/linux/debian squeeze-cran/
In this line, change "deb-src" to "deb" and run apt-get update and apt-get install r-base r-base-dev You only activated the source package repository, but you only need the repository of compiled packages, unless you use an architecture other than i386 or amd64. Kind regards, Johannes
Ran apt-get update and then apt-get install r-base r-base-dev No errors returned seemed to run clean. Ran sessionInfo() from within R and it returns 2.11.1 Am I doing something wrong? Do I need to take a different approach? I have this link but I'm not sure of what I need off of it. If I do need to pull something from it. Index of /bin/linux/debian/squeeze-cran Thanks For a backport of the latest R release to squeeze, simply add something like deb http://<favorite-cran-mirror>/ bin/linux/debian squeeze-cran/ to the file /etc/apt/sources.list on your computer and install as usual. Note that you need to substitute <favorite-cran-mirror> by one of the mirror URLs listed in http://cran.r-project.org/mirrors.html There are binaries for the i386 and amd64 architectures. You can use the source packages from deb-src http://<favorite-cran-mirror>/bin/linux/debian squeeze-cran/ to compile binaries for other platforms. With an appropriate entry in /etc/apt/sources.list, the newest R release can be installed using a command sequence like apt-get update apt-get install r-base r-base-dev [[alternative HTML version deleted]]
_______________________________________________ R-SIG-Debian mailing list R-SIG-Debian at r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-debian
_______________________________________________ R-SIG-Debian mailing list R-SIG-Debian at r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-debian
~$ whoami Mathieu Basille, Post-Doc ~$ locate Laboratoire d'?cologie Comportementale et de Conservation de la Faune + Centre d'?tude de la For?t D?partement de Biologie Universit? Laval, Qu?bec ~$ info http://ase-research.org/basille ~$ fortune ``If you can't win by reason, go for volume.'' Calvin, by Bill Watterson.