error capture
FAQ 7.32 indicates why 'tryCatch' may be preferable to 'try' for this sort of thing: http://cran.r-project.org/doc/FAQ/R-FAQ.html#How-can-I-capture-or-ignore-errors-in-a-long-simulation_003f Kingsford Jones
On Sun, May 4, 2008 at 9:52 PM, Tim Reid <treid at utas.edu.au> wrote:
Hi all,
I am currently running some R code bootstrapping some data and
running GLMs on the sampled data sets. Occasionally the data sets
that are sampled cause errors in the GLM (usually with the message
"Error in solve.default(as.matrix(fit$hessian)) "). Currently, if
this occurs, the program stops and exits. I would like to know if
there is a way I can instead of having the program terminate, to get
the program to step through that problem and continue further on in
the program (i.e. getting it to re-sample the data again).
Any help would be much appreciated,
tim.
-----------------------------------------------------------------------
Tim Reid | PhD Candidate
Quantitative Marine Sciences/ Antarctic Wildlife Research Unit
School of Zoology
University of Tasmania
PO Box 252-05
Hobart Tasmania 7001
Australia
phone: +61 3 6226 2594 | mob: 0404 668 363
www.zoo.utas.edu.au/awru/
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