repeated measures with multivariate data

dear list,

i searched though the archives and the question of repeated measure analysis
with species data was often brought up but, as far as i found, never clearly
worked out.

if i have, say two time points at wich i sampled replicated plots and thus
had replicated paired mutivariate obervations, how to deal with them
properly. 

if i used adonis, to restrict permutations on the pairs of plots (as this
would be done in an univariate permutation test for paired observations)
does not make sense to me but i'm also dubious about neglecting the
dependence of the pairing.

any ideas would be highly appreciated,
kay

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Kay Cichini
Postgraduate student
Institute of Botany
Univ. of Innsbruck
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