An embedded and charset-unspecified text was scrubbed... Name: not available URL: <https://stat.ethz.ch/pipermail/r-sig-ecology/attachments/20130430/bd147793/attachment.pl>
large-scale individual-based simulation
3 messages · David García Callejas, David Valentim Dias, Julian Burgos
An embedded and charset-unspecified text was scrubbed... Name: not available URL: <https://stat.ethz.ch/pipermail/r-sig-ecology/attachments/20130430/5214f162/attachment.pl>
MASON is another good option. It requires some knowledge of Java, though. http://cs.gmu.edu/~eclab/projects/mason/ David Valentim Dias writes:
David, I was stuck with a similar problem. I tried creating LUCC models and R can't do the job in the required speed and or just stop working because of lack of memory. Problem with R is default type is double even for integers and this behaviour will eat all memory very fast for 10? agents, you need to think about space where they "move/action" too. If you can afford huge memory speed can be problematic too. I switched to Netlogo for this type of model and the results are surprising good. Memory can be a problem in Netlogo too but speed isn't. There is another ABM softwares who can run on GPU and number of agents aren't a problem. Good luck 2013/4/30 David Garc?a Callejas <david.garcia.callejas at gmail.com>
H
?i all,
I am interested in performing a large-scale (10?-10? agents)
individual-based simulation in R. I have checked other options (NetLogo,
Repast) and they either can't handle such quantities of agents or require
deep knowledge of other programming languages. So I would like to know if
there are any comprehensive packages optimized to perform IB simulations...
I have heard about the "simecol" package, has anyone used it for
large-scale simulations?
Every suggestion is welcome, thanks
David
[[alternative HTML version deleted]]
_______________________________________________ R-sig-ecology mailing list R-sig-ecology at r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-ecology
Julian Mariano Burgos, PhD Hafranns?knastofnunin/Marine Research Institute Sk?lagata 4, 121 Reykjav?k, Iceland S?mi/Telephone : +354-5752037 Br?fs?mi/Telefax: +354-5752001 Netfang/Email: julian at hafro.is