Hi all, The new package psmcr is a port of the program 'psmc' by Heng Li [1]. It is available on GitHub: https://github.com/emmanuelparadis/psmcr There is a short tutorial showing a typical usage with a few tips. In addition to fitting the PSMC from R (and the bootstrap), psmcr has tools to prepare the input data and graphical tools to display the results. Feedback welcome! Best, Emmanuel [1] Li, H. and Durbin, R. (2011) Inference of human population history from individual whole-genome sequences. Nature 475: 493-U84.
new package psmcr
1 message · Emmanuel Paradis