Is there a convenient way to subset a genind object using a vector of the subset of individuals at one pass ( so that it correctly subsets genotype table, individuals, populations, XY coordinates etc?) effective working on the genind object as data.frame[SubsetVector,] would on a data frame? I realist that I can do this for each component of the object in turn but thought there was a faster method that I cannot now find. thanks.
Subsetting a genind object.
2 messages · Nevil Amos, Daniel Schmidt
If your genind object is g, then: g <- g[i=c(1:10,21:30)] would give you a new genind g, with individual indexes 1 to 10 and 21 to 30. All other associated info (tab, pop etc) comes along for the ride. If that's what you're after...
On Thu, Feb 2, 2017 at 9:53 AM, nevil amos <nevil.amos at gmail.com> wrote:
Is there a convenient way to subset a genind object using a vector of the
subset of individuals at one pass ( so that it correctly subsets genotype
table, individuals, populations, XY coordinates etc?)
effective working on the genind object as
data.frame[SubsetVector,] would on a data frame?
I realist that I can do this for each component of the object in turn but
thought there was a faster method that I cannot now find.
thanks.
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