[Gstat-info] Re: Problem installing gstat into R

Hi Edzer and Roger,
 
The R ./configure was taken from the Installation and Administration 
manual for installing R on Cygwin.
 
i have tried R CMD INSTALL ./gstat_0.9-42.tar.gz with the same result 
as install.packages.
 
Results from session info.

sessionInfo()

R version 2.6.1 (2007-11-26)
i686-pc-cygwin

locale:
C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

loaded via a namespace (and not attached):
[1] rcompgen_0.1-17

 

rgdal loads okay (have not tested for working)

library(rgdal)

Loading required package: sp
Geospatial Data Abstraction Library extensions to R successfully loaded

 
Thank you for helping me with the problem.
 
CHeers,
Ed
 
On 12/12/2007, *Roger Bivand* <Roger.Bivand at nhh.no 
<mailto:Roger.Bivand at nhh.no>> wrote:

    On Wed, 12 Dec 2007, Edzer Pebesma wrote:

    > Edward,
    >
    > My experiences here are limited; what I always do to install a

    source

    > package is something like:
    >
    > R CMD INSTALL -l /home/edzer/S/library R/gstat_0.9-42.tar.gz
    >
    > Could you please verify whether that works?

    From the output below, I think that we know too little about the
    system to
    call. What does sessionInfo() say inside R? Secondly, why is your
    ./configure the way it is? Did you make install R itself - it looks as
    though the R shared objects are not being found. If gstat doesn't
    install,
    I'm surprised that rgdal did.

    Roger

    > --
    > Edzer
    >
    > Edward Tomlinson wrote:

    >> Hi List,
    >>
    >> I am not entirely sure where i should be asking this question

    so i will

    >> start here.
    >>
    >> I am trying to install the gstat package into R so it can be

    used by a

    >> component of GRASS.
    >>
    >> However i cannot get gstat installed. I have already installed

    spgrass6

    >> package and its dependencies, however gstat will not install.

    Details below.

    >>
    >> Any ideas would be appreciated.
    >>
    >> Further info...
    >>
    >> I downloaded and installed from source. Original files came

    from CRAN

    >> website.
    >>
    >> I followed instructions from Install and Admin manual. It

    suggested to build

    >> in the following way...
    >>
    >> ./configure --disable-nls --disable-mbcs --enable-R-shlib
    >> make
    >>
    >> Everything worked fine. I have been able to install other

    packages for R

    >> such as maptools, spgrass6 and its dependencies.
    >>
    >> Thanks,
    >> Ed
    >>
    >> R version 2.6.1 (2007-11-26)
    >> Copyright (C) 2007 The R Foundation for Statistical Computing
    >> ISBN 3-900051-07-0
    >>
    >>

    >>> install.packages("gstat")
    >>>

    >> ...
    >> Content type 'application/x-tar' length 895559 bytes (874 Kb)
    >> opened URL
    >> ==================================================
    >> downloaded 874 Kb
    >>
    >> /usr/local/lib/R/library
    >> * Installing *source* package 'gstat' ...
    >> ....
    >> gcc -std=gnu99 -shared -L/usr/local/lib -o gstat.dll block.o

    chfactor.o

    >> copy.o d
    >> ata.o direct.o err.o fit.o getest.o gls.o glvars.o hsehldr.o

    init.o ivecop.olex

    >> .o lm.o lufactor.o machine.o mapio.o matop.o matrixio.o

    meminfo.o memory.omemst

    >> at.o msim.o norm.o nsearch.o otherio.o parse.o plot.o polygon.o

    pqueue.opredict

    >> .o pxop.o qrfactor.o random.o read.o reml.o report.o s.o

    select.o sem.o

    >> sim.o so
    >> lve.o sparse.o sparseio.o spbkp.o spchfctr.o splufctr.o sprow.o

    spswap.o

    >> stat.o
    >> submat.o userio.o utils.o vario.o vario_fn.o vario_io.o vecop.o

    version.owritec

    >> md.o xvalid.o   -L/usr/local/lib/R/lib -lR
    >> s.o: In function `gstat_predict':
    >> /tmp/R.INSTALL.uA1352/gstat/src/s.c:495: undefined reference to
    >> `_R_ProcessEvent
    >> s'
    >> /tmp/R.INSTALL.uA1352/gstat/src/s.c:517: undefined reference to
    >> `_R_ProcessEvent
    >> s'
    >> Info: resolving _R_NaReal by linking to __imp__R_NaReal

    (auto-import)

    >> Info: resolving _R_DimSymbol by linking to __imp__R_DimSymbol

    (auto-import)

    >> collect2: ld returned 1 exit status
    >> make: *** [gstat.dll ] Error 1
    >> chmod: cannot access `/usr/local/lib/R/library/gstat/libs/*':

    No such file

    >> or di
    >> rectory
    >> ERROR: compilation failed for package 'gstat'
    >> ** Removing '/usr/local/lib/R/library/gstat'
    >>
    >>
    >> Warning message:
    >> In install.packages("gstat") :
    >>   installation of package 'gstat' had non-zero exit status
    >>
    >>
    >>      [[alternative HTML version deleted]]
    >>
    >> _______________________________________________
    >> R-sig-Geo mailing list
    >> R-sig-Geo at stat.math.ethz.ch <mailto:R-sig-Geo at stat.math.ethz.ch>
    >> https://stat.ethz.ch/mailman/listinfo/r-sig-geo
    >>

    >
    > _______________________________________________
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    <https://stat.ethz.ch/mailman/listinfo/r-sig-geo>

    >

    --
    Roger Bivand
    Economic Geography Section, Department of Economics, Norwegian
    School of
    Economics and Business Administration, Helleveien 30, N-5045 Bergen,
    Norway. voice: +47 55 95 93 55; fax +47 55 95 95 43
    e-mail: Roger.Bivand at nhh.no <mailto:Roger.Bivand at nhh.no>


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