library fails to load in linux
Hi Rolf. Thank you for your quick response! I had tried using install.packages, and just now tried the method you suggested (R CMD INSTALL spatstat_1.42-1.tar.gz) with the same results. By the way, we have the same problem when we try on RHEL 6.4 on a different machine with R 3.2.0. I should mention that both of these are VM's. I can send you the entire stack trace if it will help. --Harold Rolf Turner <r.turner at auckland.ac.nz> wrote on 06/25/2015 01:23:18 AM:
From: Rolf Turner <r.turner at auckland.ac.nz> To: Harold-Jeffrey Ship/Haifa/IBM at IBMIL Cc: r-sig-geo at r-project.org, Adrian Baddeley
<adrian.baddeley at uwa.edu.au>
Date: 06/25/2015 01:23 AM
Subject: Re: [R-sig-Geo] library fails to load in linux
How did you effect the installation command? Did you use
install.packages(.....)
from the R command line? Or did you use a precompiled Ubuntu binary? Or
....?
When I do
install.packages("spatstat", <etc.>)
from the R command line, under my antiquated Fedora system, it installs
with no problems.
Have you tried downloading the tarball and installing from source, i.e.
R CMD INSTALL spatstat_1.42-1.tar.gz
???
We need more detail. If there really is a problem, we need to get to
the bottom of it.
You might possibly get more help on the R-sig-Debian list; please keep
us informed of developments.
cheers,
Rolf Turner
On 25/06/15 01:39, Harold-Jeffrey Ship wrote:
I have Ubuntu 12.04 Precise. I just installed R and want to install spatstat. This is the R information: R version 3.2.1 (2015-06-18) -- "World-Famous Astronaut" Copyright (C) 2015 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu (64-bit) When I try to install spatstat things look fine at first until it
tries to
verify the installation by loading the library. It crashes, with the
below
error message (snipped). Any help would be greatly appreciated! installing to
/home/harold/R/x86_64-pc-linux-gnu-library/3.2/spatstat/libs
** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded *** stack smashing detected ***: /usr/lib/R/bin/exec/R terminated ======= Backtrace: ========= /lib/x86_64-linux-gnu/libc.so.6(__fortify_fail+0x37)[0x7f3895976e57] /lib/x86_64-linux-gnu/libc.so.6(__fortify_fail+0x0)[0x7f3895976e20] /usr/lib/R/lib/libR.so(+0xc9825)[0x7f3895f11825] [[alternative HTML version deleted]]