rgdal install fails (following GDAL building from source)
I finally got the problem: there was a mistake within my /etc/ld.so.conf.d file that linked the libgdal library into the system. For the record, my mistake was to put the full path to the file plus the filename: $ cat /etc/ld.so.conf.d/gdal.conf /usr/local/lib/libgdal.so.1 I resolved the problem simply by modifying /etc/ld.so.conf.d/gdal.conf to /usr/local/lib, and ldconfig as su. Pierre 2010/7/19 Roger Bivand <Roger.Bivand at nhh.no>:
On Mon, 19 Jul 2010, Pierre Roudier wrote:
I think that there is a GDAL plugins directory somewhere in /usr/local - if it is there, it contains a reference to your previous GDAL install, probably called gdalplugins. Try removing it, or changing its name.
Yes, there was a gdalplugins folder in /usr/lib/, containing ogr_GRASS.so. I removed the whole folder, but unfortunatley, the same error is appearing on compilation of rgdal.
There must still be messes left around in various places. Does using locate, for example locate libgdal and locate gdalplugins help? Otherwise remove and reinstall PROJ.4 and GDAL. Most likely debris after experiments with the GRASS plugin (and maybe QGIS) are still around. Roger
Thanks anyway, Pierre
Roger
Thanks again, Pierre
Roger
Thanks for the help, Pierre
Hope this helps, Roger
Thanks for any hints. Here is my config: uname -a Linux 2.6.33.6-147.fc13.x86_64 #1 SMP Tue Jul 6 22:32:17 UTC 2010 x86_64 x86_64 x86_64 GNU/Linux Distro : Fedora 13 x86_64 (running KDE) gdalinfo --version GDAL 1.7.2, released 2010/04/23 The infamous libgdal.so file is located in /usr/local/lib/ sessionInfo() R version 2.11.1 (2010-05-31) x86_64-redhat-linux-gnu locale: [1] LC_CTYPE=en_US.UTF-8 ? ? ? LC_NUMERIC=C [3] LC_TIME=en_US.UTF-8 ? ? ? ?LC_COLLATE=en_US.UTF-8 [5] LC_MONETARY=C ? ? ? ? ? ? ?LC_MESSAGES=en_US.UTF-8 [7] LC_PAPER=en_US.UTF-8 ? ? ? LC_NAME=C [9] LC_ADDRESS=C ? ? ? ? ? ? ? LC_TELEPHONE=C [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats ? ? graphics ?grDevices utils ? ? datasets ?methods ? base loaded via a namespace (and not attached): [1] tcltk_2.11.1 tools_2.11.1 Cheers, Pierre
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-- Roger Bivand Economic Geography Section, Department of Economics, Norwegian School of Economics and Business Administration, Helleveien 30, N-5045 Bergen, Norway. voice: +47 55 95 93 55; fax +47 55 95 95 43 e-mail: Roger.Bivand at nhh.no
-- Roger Bivand Economic Geography Section, Department of Economics, Norwegian School of Economics and Business Administration, Helleveien 30, N-5045 Bergen, Norway. voice: +47 55 95 93 55; fax +47 55 95 95 43 e-mail: Roger.Bivand at nhh.no
-- Roger Bivand Economic Geography Section, Department of Economics, Norwegian School of Economics and Business Administration, Helleveien 30, N-5045 Bergen, Norway. voice: +47 55 95 93 55; fax +47 55 95 95 43 e-mail: Roger.Bivand at nhh.no
-- Roger Bivand Economic Geography Section, Department of Economics, Norwegian School of Economics and Business Administration, Helleveien 30, N-5045 Bergen, Norway. voice: +47 55 95 93 55; fax +47 55 95 95 43 e-mail: Roger.Bivand at nhh.no