Error loading rgdal package on Fedora 7
On Wed, 17 Oct 2007, Carsten Jaeger wrote:
Hello, I'm using R version 2.5.1 on Fedora 7. I just installed the rgdal package from source, compilation was without problems. However, when I try to load the package I get the following error message:
library(rgdal)
Loading required package: rgdal Loading required package: sp Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library '/home/xxxx/R/rgdal/libs/rgdal.so': /usr/lib/atlas/liblapack.so.3: undefined symbol: ATL_chemv [1] FALSE Obviously, liblapack.so.3 is incompatible with rgdal.so. ATLAS version is 3.6.0 which is the most current version available for F7 as rpm (atlas-3.6.0-11.fc6).
Where did your gdal come from? The rgdal package does not depend on lapack, nor as far as I know does gdal itself (it links against the gdal and proj4 shared objects). Can you use any of the gdal utilities, such as gdalinfo or ogrinfo from the command line? I have a Fedora 7 box, installed gdal and rgdal from source, do not use ATLAS and have no lapack or blas RPMs after earlier version problems (R uses the one it is shipped with - but not for rgdal, I believe). Roger
Any ideas? Does upgrading to ATLAS 3.8 help? Thanks in advance, Carsten
_______________________________________________ R-sig-Geo mailing list R-sig-Geo at stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/r-sig-geo
Roger Bivand Economic Geography Section, Department of Economics, Norwegian School of Economics and Business Administration, Helleveien 30, N-5045 Bergen, Norway. voice: +47 55 95 93 55; fax +47 55 95 95 43 e-mail: Roger.Bivand at nhh.no