Variogram Paradox
On 04/08/2013 11:11 PM, Edzer Pebesma wrote:
On 04/08/2013 08:12 PM, Saman Monfared wrote:
Dear All, We know that the estimation of covariance parameters is an important problem for spatial processes because the variogram shows the spatial variation. In many cases to select the best variogram model some parametric models considered and some criterions such as mean prediction error, mean square error, correlation between the observed and predicted values and correlation between the predicted and the residual values in cross validation method uses to select the best variogram model. Below codes get an example whit two variogram models which are have very different parameters (sill, range and nugget) but values of mentioned criterions are approximately equal for them. Why? What is the role of variogram? What is the role of empirical variogram when a variogram function which is so far away than it can has approximately equaled cross validation results. library(gstat) data(meuse) coordinates(meuse)<-~x+y v<-variogram(log(zinc)~1,meuse) v.f<-fit.variogram(v,vgm(.205,"Mat",700,0.008,kappa=1)) plot(v,v.f) v.ff<-fit.variogram(v,vgm(.205,"Mat",700,0.008,kappa=1) ,fit.sills =F, fit.ranges =F) plot(v,v.ff) k1<-krige.cv(log(zinc)~1,meuse,v.f) k2<-krige.cv(log(zinc)~1,meuse,v.ff) mean(k1$residual) mean(k2$residual) mean(k1$residual^2) mean(k2$residual^2) cor(k1$var1.pred,k1$observed) cor(k2$var1.pred,k2$observed) cor(k1$var1.pred,k1$residual) cor(k2$var1.pred,k2$residual) Best, Saman.
Because the ratio of the two models, v1 = variogramLine(v.f, 500) v2 = variogramLine(v.ff, 500) plot(v1[,1], v1[,2]/v2[,2]) is fairly constant. If a variogram model gets multiplied by a positive constant, the kriging predictions will remain identical: v.fff = v.ff v.ff$psill = v.ff$psill * 1234 # or any pos. number
I meant, of course: v.fff$psill <- v.fff$psill * 1234 # or any pos. number k3 <- krige.cv(log(zinc)~1,meuse,v.fff) which leads to
summary(k3$var1.pred-k2$var1.pred)
Min. 1st Qu. Median Mean 3rd Qu. Max. -3.020e-14 -9.326e-15 0.000e+00 -1.490e-16 7.994e-15 3.286e-14 i.e., essentially zeros:
all.equal(k3$var1.pred, k2$var1.pred)
[1] TRUE
k3 <- krige.cv(log(zinc)~1,meuse,v.fff)
summary(k3$var1.pred-k2$var1.pred)
Min. 1st Qu. Median Mean 3rd Qu. Max.
0 0 0 0 0 0
Edzer Pebesma Institute for Geoinformatics (ifgi), University of M?nster Weseler Stra?e 253, 48151 M?nster, Germany. Phone: +49 251 8333081, Fax: +49 251 8339763 http://ifgi.uni-muenster.de http://www.52north.org/geostatistics e.pebesma at wwu.de