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Implementing and interpreting join count analysis with spdep

On Tue, 7 Feb 2017, Justin Schuetz wrote:

            
At this point you are probably deciding the outcome of the tests - 
different weights will give different outcomes. The fewer neighbours the 
better is a good rule, otherwise the relationships may be heavily 
smoothed. See vignette("nb").
It is also possible to use joincount.multi() to compare all with all (here 
1-1, 1-2, 1-3, 2-2, 2-3, 3-3), rather than 1 with not-1 and so on. Also 
look at alternative=, as your 3-3 looks close to significant negative 
autocorrelation (for your preferred weights).

Roger