Problem installing rgeos
Thanks for the suggestions, but I think what I need is help tracking down what the exact error is in the compilation. Let me try again with the part of the output describing the error:
install.packages("rgeos", dependencies = F, repos = "http://cran.fhcrc.org/")
. . . checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... configure: error: in `/tmp/RtmpUjYUle/R.INSTALL41c15690b9e1/rgeos': configure: error: cannot run C compiled programs. If you meant to cross compile, use `--host'. See `config.log' for more details ERROR: configuration failed for package 'rgeos' * removing '/files3/R/R-3.2.1_install/lib64/R/library/rgeos' It says I should refer to config.log for more details. The only config.log file I can find in the directory tree is the one for geos, which I installed a couple of years ago, and did not give me problems with previous installations of rgeos under earlier releases of R. In case there is a clue, here is the output in that config.log around the cross compile message: configure:3682: result: configure:3704: checking whether we are cross compiling configure:3712: gcc -o conftest conftest.c >&5 configure:3716: $? = 0 configure:3723: ./conftest Is there a config.log for the attempted rgeos installation? Where would I find it?
You're build is failing pretty early in the configuration process which suggests you are missing some tools in your development environment.? The latest geos was found. Was that a binary or built from source?? If from source you have the necessary tools in your dev environment and it may merely be a function of dropping the depends in you install.packages call....
Rgeos was built from source. Thanks, Scott Waichler PNNL