Message-ID: <5bd590a6-b78e-1abd-ac49-a60c76f9100f@uni-muenster.de>
Date: 2021-02-09T20:18:01Z
From: Edzer Pebesma
Subject: Species distribution modeling with presence-only data using log-Gaussian Cox process
In-Reply-To: <CABkCotSBKrxhqkR4TjVhsuse-Gtg9820XUuRg2Neb0zSc9bzmw@mail.gmail.com>
A way out of this may be to make a local copy of the lgcp sources,
remove the rpanel dependency from DESCRIPTION, and install it from
there. You won't get the functions that need rpanel, but those might not
be essential.
On 09/02/2021 20:09, Manuel Sp?nola wrote:
> Thank you very much Edzer.
>
> I tried to install lgcp, but I got an error message regarding BWidget.
> I think that Bwidget is an external software and I don't know how to
> install it in MacOS (Big Sur 11.2).
>
> Manuel
>
> This is the error?that I get when trying to install lgcp in R 4.0.3:
>
> xcrun: error: invalid active developer path
> (/Library/Developer/CommandLineTools), missing xcrun at:
> /Library/Developer/CommandLineTools/usr/bin/xcrun
> Warning message:
> In system2("/usr/bin/otool", c("-L", shQuote(DSO)), stdout = TRUE) :
> ? running command ''/usr/bin/otool' -L
> '/Library/Frameworks/R.framework/Resources/library/tcltk/libs//tcltk.so'' had
> status 1
> Error in structure(.External(.C_dotTcl, ...), class = "tclObj") :
> ? [tcl] can't find package BWidget.
>
> Error: unable to load R code in package ?rpanel?
> Execution halted
>
> El mar, 9 feb 2021 a las 12:51, Edzer Pebesma
> (<edzer.pebesma at uni-muenster.de <mailto:edzer.pebesma at uni-muenster.de>>)
> escribi?:
>
> Have you tried package lgcp?
>
> On 09/02/2021 17:26, Manuel Sp?nola wrote:
> > Dear list members,
> >
> > I would like to know of any R package that can be used for
> modeling species
> > distribution with presence-only data using log-Gaussian Cox process.
> >
> > Manuel
> >
>
> _______________________________________________
> R-sig-Geo mailing list
> R-sig-Geo at r-project.org <mailto:R-sig-Geo at r-project.org>
> https://stat.ethz.ch/mailman/listinfo/r-sig-geo
>
>
>
> --
> *Manuel Sp?nola, Ph.D.*
> Instituto Internacional en Conservaci?n y Manejo de Vida Silvestre
> Universidad Nacional
> Apartado 1350-3000
> Heredia
> COSTA RICA
> mspinola at una.cr <mailto:mspinola at una.ac.cr>
> mspinola10 at gmail.com <mailto:mspinola10 at gmail.com>
> Tel?fono: (506) 8706 - 4662
> Personal website: Lobito de r?o
> <https://sites.google.com/site/lobitoderio/>
> Institutional website: ICOMVIS <http://www.icomvis.una.ac.cr/>