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Sampling via polygons question

On Tue, 2 Aug 2011, Jonathan Greenberg wrote:

            
Could you please provide a self-contained code example, possibly with a 
simple downloadable shapefile of polygons covering your case? Are the 
polygons intended to touch? are the buffers in fact the pixels 
(rectangular) or circular? I think I see what you mean, but may well 
misunderstand your intentions.

Roger