Hi, members I'm Marcelo, oceanographer from Brazil and actually work with fishery acoustical data of brazilian shelf. I'm using R, GMT, ArcView (windows) in Linux redhat 9.0 (Athlon Xp 1.6Ghz, 20Gb 540mb mem). I run kriging analysis using gstat (R1.8.1) in fishery acoustic data: x y sa (backscatering acoustic parameter) the output is ordinary kriging surface. I need overlap these output to a map of Brazil coastal shelf and slope but i don't make this. I have a file (ascii) of Brazil coastal, and shapefile. Someone can helps me with this problem? I try in gimp, kpaint and others but i need a better solution to learn more in R. Thanks in advance! Marcelo
output gstat and maps
6 messages · Marcelo Laia, Ernesto Jardim, Hisaji ONO +2 more
Hi Marcelo, If you have everything on the same coordenate system you can just plot the Brasilian coast with plot(..., type="l") and add kriging surface with points or something similar. Hope this helps EJ
On Tue, 2004-01-13 at 15:27, Marcelo Bruno wrote:
Hi, members I'm Marcelo, oceanographer from Brazil and actually work with fishery acoustical data of brazilian shelf. I'm using R, GMT, ArcView (windows) in Linux redhat 9.0 (Athlon Xp 1.6Ghz, 20Gb 540mb mem). I run kriging analysis using gstat (R1.8.1) in fishery acoustic data: x y sa (backscatering acoustic parameter) the output is ordinary kriging surface. I need overlap these output to a map of Brazil coastal shelf and slope but i don't make this. I have a file (ascii) of Brazil coastal, and shapefile. Someone can helps me with this problem? I try in gimp, kpaint and others but i need a better solution to learn more in R. Thanks in advance! Marcelo
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Mmm, yeah, the trouble is that R is not a GIS, and GMT and ArcView are no statistics packages. I think you can import shapefiles using packages maptools, and perhaps Rmap (not on CRAN?). I imaging you can then plot the values with image(values.krige) and add polygons to the plot with the plot commands in maptools, using the add=TRUE argument. levelplot, which I like much more because it draws a legend, can currently not do this easily (i.e., without customizing panel functions); has anyone looked into this? -- Edzer
Marcelo Bruno wrote:
Hi, members I'm Marcelo, oceanographer from Brazil and actually work with fishery acoustical data of brazilian shelf. I'm using R, GMT, ArcView (windows) in Linux redhat 9.0 (Athlon Xp 1.6Ghz, 20Gb 540mb mem). I run kriging analysis using gstat (R1.8.1) in fishery acoustic data: x y sa (backscatering acoustic parameter) the output is ordinary kriging surface. I need overlap these output to a map of Brazil coastal shelf and slope but i don't make this. I have a file (ascii) of Brazil coastal, and shapefile. Someone can helps me with this problem? I try in gimp, kpaint and others but i need a better solution to learn more in R. Thanks in advance! Marcelo
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1 day later
Hi. Against images imported by RGDAL, can R execute?Tomlin's Map Algebra or Cartographic Modelling(http://mutate.echiron.com/doc_center/library/pcraster/x30.htm)? Regards.
Hi. Against images imported by RGDAL, can R execute???Tomlin's Map Algebra or Cartographic Modelling(http://mutate.echiron.com/doc_center/library/pcraster/x30.htm)?
Cell by cell operations would work, because then you don't need to know where you are. Any other operations do need to know, and wouldn't work without functions being written. Maybe these are best handled in GIS - you refer to PCRaster, which is downloadable, although closed source, for Windows. GRASS is a cross-platform alternative, and its r.mapcalc gets you a long way - my choice would be to write a wrapper to convert the image to the structure needed to output to a GRASS raster, and do the work there. Perhaps it would help to be able to create a new GRASS LOCATION from within R running within GRASS? Roger
Regards.
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Roger Bivand NHH, Breiviksveien 40, N-5045 Bergen, Norway
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