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Brownian Bridge Movement model error
2 messages · Leila Brook, Clément Calenge
Dear Leila,
This is indeed a bug. I have corrected it and I will upload the
correction to CRAN asap. It will be available in a few days. Meanwhile,
sourcing the attached file (i.e. typing source("kernelbb.R")) will allow
to use the function in this context.
Best,
Cl?ment
On 09/19/2012 08:38 AM, Leila Brook wrote:
I'm sorry for cross postings, as I'm not sure where exactly to ask
this question:
I am trying to estimate a Brownian Bridge kernel home range using
adehabitatHR. I created
I created a traj file as below:
bobtraj<-as.ltraj(xy=bob_locs_ss[c("x","y")], id=bob_locs_ss$id,
date=bob_locs_ss$newdate, burst=bob_locs_ss$burst2)
Then tried to create a kernelBB as follows, with a reference grid
around the animal's home range:
bob_bbss<- kernelbb(bobtraj, sig1=4.0811, sig2=50, grid = refgrid,
byburst = TRUE, extent = 0.2)
I then got this error:
Error in as.vector(gr) : no method for coercing this S4 class to a vector
I didn't get the error and the function worked when I ran kernelBB()
without byburst=TRUE. However, I would like to keep this specification
in the model, as my data were collected at high-frequency with two
days on and two days off, and without the burst=TRUE, the kernelBB95
looks quite oversmoothed.
Can anyone provide any advice on how to fix this error?
Thanks for your help,
Leila Brook
Cl?ment CALENGE Cellule d'appui ? l'analyse de donn?es Direction des Etudes et de la Recherche Office national de la chasse et de la faune sauvage Saint Benoist - 78610 Auffargis tel. (33) 01.30.46.54.14 -------------- next part -------------- An embedded and charset-unspecified text was scrubbed... Name: kernelbb.r URL: <https://stat.ethz.ch/pipermail/r-sig-geo/attachments/20120919/fb437b1c/attachment.pl>