Dear all, I received the following feedback from the maintainers of the cluster "Brutus". ## begin quotation All MPI processes are launched by mpirun when your job starts. Rmpi simply queries those processes to find out their number and ranks. In other words, the R "cluster" is already up and running when Rmpi (or doMPI, doSNOW) starts. That is the reason you cannot spawn slaves or create a new cluster using mpi.spawn.Rslaves(), startMPIcluster() or makeCluster(). The proof is that the "hello world" example runs without error on Brutus if you remove the mpi.spawn.Rslaves() statement. I believe the problem in the present case is that registerDoMPI(cl) and registerDoSNOW(cl) require a "cluster" (cl) as argument. Unlike Rmpi, they are unable to use the pre-existing (and unnamed) cluster started by mpirun.
Error in makeMPIcluster(spec, ...): how to get a minimal example for parallel computing with doSNOW to run?
1 message · Marius Hofert