adjusting .libPaths
Hi, In R 4.2, when I look at .libPaths() from within the standard R gui, I see: .libPaths() [1] "/Users/ken/Library/R/x86_64/4.2/library" [2] "/Users/ken/Library/R/4.1/library" [3] "/Library/Frameworks/R.framework/Versions/4.2/Resources/library" From a terminal, I get
.libPaths()
[1] "/Users/ken/Library/R/4.1/library"
[2] "/Library/Frameworks/R.framework/Versions/4.2/Resources/library"
The old 4.1 directory, I suspect, should not be there. From
Sys.getenv(), I see
R_LIBS /Users/ken/Library/R/x86_64/4.2/library
R_LIBS_SITE
/Library/Frameworks/R.framework/Resources/site-library
R_LIBS_USER /Users/ken/Library/R/4.1/library
and the system Renviron file contains
uc7131:Resources ken$ grep R_LIBS etc/Renviron
R_LIBS_USER=${R_LIBS_USER:-'%U'}
R_LIBS_SITE=${R_LIBS_SITE:-'%S'}
but I wouldn't know what to adjust these to, to fix this (if I even
should).
In Rstudio (which is not the problem of this list), I also get
.libPaths()
[1] "/Users/ken/Library/R/4.1/library" [2] "/Library/Frameworks/R.framework/Versions/4.2/Resources/library" and I would guess the 4.1 entry is why Rstudio bombs when I try to execute any graphics. I would be grateful for any suggestions as to how to fix this. Thank you. best, Ken
Kenneth Knoblauch Inserm U1208 Stem-cell and Brain Research Institute 18 avenue du Doyen L?pine 69500 Bron France tel: +33 (0)4 72 91 34 77 fax: +33 (0)4 72 91 34 61 portable: +33 (0)6 84 10 64 10 http://www.sbri.fr/user/1453