Installing hexbin package (bioconductor)
The problem with source compiling is because of wrong versiong of g77. Please read the Mac OS X Faq to get the latest and correct version of g77. As for hexbin: it builds fine with this release of R for Mac OS X and related GUI (which I remember is just a wrapper around command line R). the other question is about 2.0 binaries for BioC. There was a wrong link to 1.9 packages instead of 2.0 packages in the macosx page on BioC (it was my fault as usual). It is now fixed, so the package installer of R.app should now be able to get the correct version. stefano
On Nov 9, 2004, at 8:53 PM, hadley wickham wrote:
Has anyone had any luck installing the hexbin package from bioconductor? Using gui and installing from binaries: library(hexbin) gives "Error in library(hexbin) : 'hexbin' is not a valid package -- installed < 2.0.0?" Using gui and installing from source: gives "make: g77: Command not found" (and I do have g77) Using command line and R CMD install: " * Installing *source* package 'hexbin' ... ** libs g77 -fno-common -g -O2 -c hbin.f -o hbin.o g77 -fno-common -g -O2 -c hcell.f -o hcell.o g77 -fno-common -g -O2 -c herode.f -o herode.o g77 -fno-common -g -O2 -c hsm.f -o hsm.ogcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o hexbin.so hbin.o hcell.o herode.o hsm.o -L/usr/local/lib -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2 -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../.. -lfrtbegin -lg2c -lSystem -lcc_dynamic -framework R ld: warning -L: directory name (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2) does not exist ld: warning -L: directory name (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../..) does not exist ld: can't locate file for: -lfrtbegin" Any suggestions? Thanks, Hadley
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