Loading rgl fails on 2.7.0
Thanks Simon,
Where can I find the the configure output?
As to whether I have put /usr/X11/bin on my PATH, I edited the two
files that --- according to my limited knowledge of Unix --- might be
relevant. The problem persists.
****************
cat .cshrc:
****************
set path=($path /opt/local/bin /Applications/~LocalApps/sound/Cog)
if (! $?DISPLAY && ! $?SSH_CONNECTION ) then
setenv DISPLAY `ps -ax | grep X11.app | grep -v Xauthority | grep
-v grep | awk '{print $7}' `.0
if ( $DISPLAY == '.0' )then
setenv DISPLAY :0.0
endif
echo "lias SetTitle 'settitle \[tcsh\]\ \ \ $HOST:r:r\:\:$cwd '
alias cd 'cd \!*;SetTab;SetTitle'
SetTitle;SetTab
set prompt="tcsh-% "
ISPLAY has been set to $DISPLAY"
endif
test -r /sw/bin/init.csh && source /sw/bin/init.csh
set path=(/Library/Frameworks/Python.framework/Versions/Current/bin
$path)
if ( -d /sw/bin ) then
source /sw/bin/init.csh
endif
if (! $?DISPLAY && ! $?SSH_CONNECTION ) then
setenv DISPLAY `ps -wwx | grep -F X11.app | awk '{print $NF}' |
grep -e ":[0-9]"`.0
if ( $DISPLAY == '.0' )then
setenv DISPLAY :0.0
endif
echo "DISPLAY has been set to $DISPLAY"
endif
alias settitle 'echo -n "
set path=(/Library/Frameworks/Python.framework/Versions/Current/bin
$path $PATH /usr/sbin /usr/local/bin /usr/X11/bin)
****************
cat .bashrc:
****************
if [[ -z $DISPLAY && -z $SSH_CONNECTION ]]; then
disp_no=($( ps -ax | grep X11.app | grep -v Xauthority | grep -v
grep | awk '{print $7}' ))
if [[ -n $disp_no ]];then
export DISPLAY=${disp_no}.0
else
export DISPLAY=:0.0
fi
echo "DISPLAY has been set to $DISPLAY"
fi
LC_CTYPE=en_US.UTF-8
export LC_CTYPE
export PATH="/usr/X11/bin:/usr/local/bin:/opt/local/bin:/opt/local/
sbin:$PATH"
On Feb 12, 2008, at 10:46 AM, Simon Urbanek wrote:
Michael, are you sure you have put /usr/X11/bin on your PATH? That is probably the most common mistake. The safest bet to see what went wrong is to look at the configure output. Cheers, Simon On Feb 12, 2008, at 10:20 AM, Michael Kubovy wrote:
Hi Simon, Thanks. So in Terminal: MK-MacPro:lib mk$ cd /usr/X11/lib MK-MacPro:lib mk$ sudo bash Password: bash-3.2# mv libGL.dylib libGL.dylib.apple bash-3.2# ln -s /System/Library/Frameworks/OpenGL.framework/ Libraries/libGL.dylib . Then in R:
install.packages('rgl', type = 'source', lib = '/Library/
Frameworks/R.framework/Versions/2.7/Resources/library') trying URL 'http://lib.stat.cmu.edu/R/CRAN/src/contrib/rgl_0.76.tar.gz' Content type 'application/x-gzip' length 803143 bytes (784 Kb) <snip> The downloaded packages are in /private/var/folders/TG/TG6nWu2pHYCI-BdWWiyMxU+++TI/-Tmp-/ RtmpuLU92a/downloaded_packages Warning message: In install.packages("rgl", type = "source", lib = "/Library/ Frameworks/R.framework/Versions/2.7/Resources/library") : installation of package 'rgl' had non-zero exit status no configure: error: X11 not found but required, configure aborted. ERROR: configuration failed for package 'rgl' ** Removing '/Library/Frameworks/R.framework/Versions/2.7/Resources/ library/rgl'
_____________________________
Professor Michael Kubovy
University of Virginia
Department of Psychology
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