On Sep 25, 2018, at 5:55 AM, peter dalgaard <pdalgd at gmail.com> wrote:
[Oops. Forgot to copy this back to R-sig-mac, it seems...]
Thanks, Brian,
Yes, we have previously learned the hard way that timing R releases too close to MacOS updates is a bad idea...
The manual updates haven't made it to CRAN yet, you need to look in the sources.
For those who might be curious, but lazy:
As from macOS 10.14 (?Mojave?) an additional step is needed to install the headers to /usr/include: from a Terminal run
sudo installer -pkg \
/Library/Developer/CommandLineTools/Packages/macOS_SDK_headers_for_macOS_10.14.pkg \
-target /
Alternatively, change the include path via
CPPFLAGS="-isystem /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include"
<<<<
Incidentally, probably unrelated, I discovered that the R-patched snapshots had stalled since Sep 13 due to an SVN database error. This should be cleared up now.
-pd
On 25 Sep 2018, at 08:59 , Prof Brian Ripley <ripley at stats.ox.ac.uk> wrote:
A heads up:
The Mojave update removes /usr/include and (re)installing the Command Line Tools does not put the standard system headers there. Workarounds are now described in the R-admin manual for R-devel and R-patched.
--
Brian D. Ripley, ripley at stats.ox.ac.uk
Emeritus Professor of Applied Statistics, University of Oxford