problem launching R in the administrator user account

As per FAQ 12.16 remove ~/.Rhistory and you should be fine.

Cheers,
Simon

I am new in the list, so I am sorry if this problem was previously
discussed.

Unexpectedly, I started to have problems launching R in the administrator
user session in my Mac laptop. The macbook takes a long time trying to
launch R, but at the end R does not open at all. The problem report is
copied below.

When I open the software in a different user account there is not any
problem at all.

I have uninstalled R and removed R related files (/Applications/R.app,
/Library/Frameworks/R.framework, ~/Library/R/) then I have installed R again
but the problem continues only in that specific user account.

Any help to solve this problem will be very appreciated. Thanks.

Process:         R [713]
Path:            /Applications/R.app/Contents/MacOS/R
Identifier:      org.R-project.R
Version:         R 2.10.1 GUI 1.31 Leopard build 32-bit (5537)
Code Type:       X86 (Native)
Parent Process:  launchd [652]

Date/Time:       2010-04-20 20:14:52.657 +1000
OS Version:      Mac OS X 10.6.3 (10D573)
Report Version:  6

Interval Since Last Report:          43579 sec
Crashes Since Last Report:           4
Per-App Interval Since Last Report:  659 sec
Per-App Crashes Since Last Report:   4
Anonymous UUID:                      554DD4DD-D253-4312-A227-42639D009A66

Exception Type:  EXC_BAD_ACCESS (SIGBUS)
Exception Codes: KERN_PROTECTION_FAILURE at 0x0000000000000000
Crashed Thread:  0  Dispatch queue: com.apple.main-thread

Thread 0 Crashed:  Dispatch queue: com.apple.main-thread
0   libSystem.B.dylib             0xffff132f __longcopy + 303
1   libSystem.B.dylib             0xffff0876 __memcpy + 214
2   com.apple.CoreFoundation       0x970225bc _CFStringCheckAndGetCharacters
+ 236
3   com.apple.Foundation           0x9880ba78 -[NSCFString
getCharacters:range:] + 67
4   com.apple.Foundation           0x98839378 _NSNewStringByAppendingStrings
+ 915
5   com.apple.Foundation           0x98838fca -[NSString
stringByAppendingString:] + 254
6   org.R-project.R               0x000098d8 -[RController doLoadHistory:] +
808
7   org.R-project.R               0x000072cf -[RController awakeFromNib] +
2319
8   com.apple.CoreFoundation       0x97041584 -[NSSet
makeObjectsPerformSelector:] + 196
9   com.apple.AppKit               0x917a2bc8 -[NSIBObjectData
nibInstantiateWithOwner:topLevelObjects:] + 1566
10  com.apple.AppKit               0x917a0ba0 loadNib + 257
11  com.apple.AppKit               0x917a01f4 +[NSBundle(NSNibLoading)
_loadNibFile:nameTable:withZone:ownerBundle:] + 831
12  com.apple.AppKit               0x9179feaa +[NSBundle(NSNibLoading)
loadNibFile:externalNameTable:withZone:] + 158
13  com.apple.AppKit               0x9179fdf5 +[NSBundle(NSNibLoading)
loadNibNamed:owner:] + 383
14  org.R-project.R               0x00002128 main + 296
15  org.R-project.R               0x00001fc6 start + 54

Thread 1:  Dispatch queue: com.apple.libdispatch-manager
0   libSystem.B.dylib             0x98c07b42 kevent + 10
1   libSystem.B.dylib             0x98c0825c _dispatch_mgr_invoke + 215
2   libSystem.B.dylib             0x98c07719 _dispatch_queue_invoke + 163
3   libSystem.B.dylib             0x98c074be _dispatch_worker_thread2 + 240
4   libSystem.B.dylib             0x98c06f41 _pthread_wqthread + 390
5   libSystem.B.dylib             0x98c06d86 start_wqthread + 30

Thread 2:  JavaScriptCore: FastMalloc scavenger
0   libSystem.B.dylib             0x98c0f262 __semwait_signal + 10
1   libSystem.B.dylib             0x98c0ef1e _pthread_cond_wait + 1191
2   libSystem.B.dylib             0x98c10bb8 pthread_cond_wait$UNIX2003 + 73
3   com.apple.JavaScriptCore       0x9160d276
WTF::TCMalloc_PageHeap::scavengerThread() + 614
4   libSystem.B.dylib             0x98c0e89e thread_start + 34

Thread 3:
0   libSystem.B.dylib             0x98be12fa mach_msg_trap + 10
1   libSystem.B.dylib             0x98be1a67 mach_msg + 68
2   com.apple.CoreFoundation       0x9701200f __CFRunLoopRun + 2079
3   com.apple.CoreFoundation       0x970110f4 CFRunLoopRunSpecific + 452
4   com.apple.CoreFoundation       0x97010f21 CFRunLoopRunInMode + 97
5   com.apple.Foundation           0x9887684a -[NSConnection
sendInvocation:internal:] + 2587
6   com.apple.Foundation           0x98875ca9 -[NSDistantObject
forwardInvocation:] + 411
7   com.apple.CoreFoundation       0x9704f8a4 ___forwarding___ + 1108
8   com.apple.CoreFoundation       0x9704f3d2 _CF_forwarding_prep_0 + 50
9   org.R-project.R               0x0000d655 -[RController readThread:] +
245
10  com.apple.Foundation           0x9881d8dc -[NSThread main] + 45
11  com.apple.Foundation           0x9881d88c __NSThread__main__ + 1499
12  libSystem.B.dylib             0x98c0ea19 _pthread_start + 345
13  libSystem.B.dylib             0x98c0e89e thread_start + 34

Thread 4:
0   libSystem.B.dylib             0x98c06bd2 __workq_kernreturn + 10
1   libSystem.B.dylib             0x98c07168 _pthread_wqthread + 941
2   libSystem.B.dylib             0x98c06d86 start_wqthread + 30

Thread 0 crashed with X86 Thread State (32-bit):
eax: 0x00040000  ebx: 0x0000002e  ecx: 0x00064a74  edx: 0xfffc0000
edi: 0x00040000  esi: 0xffd31000  ebp: 0xbfffec3c  esp: 0xbfffec30
 ss: 0x0000001f  efl: 0x00010246  eip: 0xffff132f   cs: 0x00000017
 ds: 0x0000001f   es: 0x0000001f   fs: 0x00000000   gs: 0x00000037
cr2: 0x00000000

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0x9595c000 - 0x95960ff7  IOSurface ??? (???)
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0x9598d000 - 0x959adfe7  libresolv.9.dylib 40.0.0 (compatibility 1.0.0)
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0x95b70000 - 0x95c54ff7  com.apple.WebKit 6531.21 (6531.21.11)
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0x95fcf000 - 0x962effeb  com.apple.CoreServices.CarbonCore 861.6 (861.6)
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0x9635f000 - 0x9639afeb  libFontRegistry.dylib ??? (???)
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0x96a31000 - 0x96a45ffb  com.apple.speech.synthesis.framework 3.10.35
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0x98341000 - 0x98355fe7  libbsm.0.dylib ??? (???)
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0x98411000 - 0x9853dfff  com.apple.audio.toolbox.AudioToolbox 1.6.3 (1.6.3)
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0xffff0000 - 0xffff1fff  libSystem.B.dylib ??? (???)
<06A5336A-A6F6-4E62-F55F-4909A64631C2> /usr/lib/libSystem.B.dylib

Model: MacBook5,1, BootROM MB51.007D.B03, 2 processors, Intel Core 2 Duo, 2
GHz, 2 GB, SMC 1.32f8
Graphics: NVIDIA GeForce 9400M, NVIDIA GeForce 9400M, PCI, 256 MB
Memory Module: global_name
AirPort: spairport_wireless_card_type_airport_extreme (0x14E4, 0x8D),
Broadcom BCM43xx 1.0 (5.10.91.27)
Bluetooth: Version 2.3.1f4, 2 service, 2 devices, 1 incoming serial ports
Network Service: AirPort, AirPort, en1
Serial ATA Device: FUJITSU MHZ2160BH FFS G1, 149.05 GB
Serial ATA Device: HL-DT-ST DVDRW  GS21N
USB Device: Cruzer Micro, 0x0781  (SanDisk Corporation), 0x5151, 0x24100000
USB Device: Built-in iSight, 0x05ac  (Apple Inc.), 0x8507, 0x24400000
USB Device: Apple Internal Keyboard / Trackpad, 0x05ac  (Apple Inc.),
0x0236, 0x04600000
USB Device: IR Receiver, 0x05ac  (Apple Inc.), 0x8242, 0x04500000
USB Device: BRCM2046 Hub, 0x0a5c  (Broadcom Corp.), 0x4500, 0x06100000
USB Device: Bluetooth USB Host Controller, 0x05ac  (Apple Inc.), 0x8213,
0x06110000

_____________________________________

Andres Merino-Viteri
Centre for Tropical Biodiversity and Climate Change Research
School of Marine and Tropical Biology
James Cook University
Townsville, QLD 4811
Australia

E-mail: andres.merinoviteri at jcu.edu.au
          amerinoviteri at gmail.com

www.jcu.edu.au/ctbcc

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