trying to compile packages from source, but lacking /opt/local/bin/gcc-mp-5
On 21/11/2017 04:03, Vincent Carey wrote:
%vjcair> R CMD config CC /opt/local/bin/gcc-mp-5 I don't seem to be able to override this using environment variable CC. And
When all else fails, read the manual (but, see the posting guide, before posting here)! This is covered in, e.g., https://cran.r-project.org/doc/manuals/r-release/R-admin.html#macOS-packages https://cran.r-project.org/doc/manuals/r-release/R-admin.html#Customizing-package-compilation
I cannot see how to install gcc-mp-5. This version of R was obtained from r.research.att.com, R-3.4-branch-el-capitan.pkg. I would have expected clang to be the c compiler for this build. I will
It was for the released version of 3.4.2. Problems with off-CRAN builds are best addressed to the builder, here Simon Urbanek. But that is a month-old snapshot build ... I don't understand why you did not simply update it, and I see 'clang' in the current snapshot.
appreciate any suggestions. As it stands, any installation from source requiring compilation throws errors like /bin/sh: /opt/local/bin/g++-mp-5: No such file or directory R version 3.4.2 Patched (2017-10-20 r73567) -- "Short Summer" Copyright (C) 2017 The R Foundation for Statistical Computing Platform: x86_64-apple-darwin15.6.0 (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. Natural language support but running in an English locale R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R.
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R version 3.4.2 Patched (2017-10-20 r73567) Platform: x86_64-apple-darwin15.6.0 (64-bit) Running under: macOS Sierra 10.12.6 Matrix products: default BLAS: /Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libRblas.0.dylib LAPACK: /Library/Frameworks/R.framework/Versions/3.4 [[alternative HTML version deleted]]
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