multithreading package failure?
Jan, it fails due to timeout (i.e. the build gets killed after 30 minutes which is why you don't see any further output). So could it be that your example just take too long to finish? If it helps, this is the tail of the output: $ tail ruimtehol-Ex.Rout + dim = 25, epoch = 25, minCount = 2, + negSearchLimit = 1, maxNegSamples = 2) Start to initialize starspace model. Build dict from input file : /tmp/RtmptpPQy0/textspace_14cc02e34905e.txt Read 0M words Number of words in dictionary: 1274 Number of labels in dictionary: 0 Loading data from file : /tmp/RtmptpPQy0/textspace_14cc02e34905e.txt Total number of examples loaded : 470 2019-06-23 12:40:46 Initialising with learning rate 0.01 Cheers, Simon
On Jun 24, 2019, at 8:11 AM, Jan Wijffels <jwijffels at bnosac.be> wrote: Dear r-sig-mac mailing list, I don't own a Mac but I'm the maintainer of the ruimtehol R package which FAILS on CRAN on Mac only (see logs at https://cran.r-project.org/web/checks/check_results_ruimtehol.html) I would like to get rid of the FAIL note on CRAN but I'm a bit stabbing in the dark about how as there is not a lot of information on the check page on the reason of failure. The package is developped at https://github.com/bnosac/ruimtehol and probably the failure is due to multi-threading as the only 2 things which are different on MacOS is the code at https://github.com/bnosac/ruimtehol/blob/da1cd4da6bbcc6a7cc4c346989e8476f37864091/src/Starspace/src/model.cpp#L31 and at https://github.com/bnosac/ruimtehol/blob/da1cd4da6bbcc6a7cc4c346989e8476f37864091/src/Starspace/src/model.cpp#L38 Currently R package ruimtehol apparently has been built fine at least once on CRAN as a Mac OS a binary is available at https://CRAN.R-project.org/package=ruimtehol Also R CMD check ran today on 2019/06/24 on rhub running Mac OS runs fine as shown in the log at https://builder.r-hub.io/status/ruimtehol_0.2.1.tar.gz-98f98671fd5fe78842e5bf463f1fe05c, which makes me wonder what is the differences in compiler setup regarding rhub and CRAN on Mac OS? A user of the package has managed to get the package working as shown at issue https://github.com/bnosac/ruimtehol/issues/10#issuecomment-458311181 He basically did change the compiler he used, namely did brew install llvm and then fixed his compiler setup as follows CC=/usr/local/opt/llvm/bin/clang #-fopenmp CXX=/usr/local/opt/llvm/bin/clang++ #-fopenmp CFLAGS=-g -O3 -Wall -pedantic -std=gnu99 -mtune=native -pipe CXXFLAGS=-g -O3 -Wall -pedantic -std=c++11 -mtune=native -pipe LDFLAGS=-L/usr/local/opt/gettext/lib -L/usr/local/opt/llvm/lib -Wl,-rpath,/usr/local/opt/llvm/lib CPPFLAGS=-I/usr/local/opt/gettext/include -I/usr/local/opt/llvm/include The Makevars in the package looks like this CXX_STD = CXX11 PKG_LIBS = -pthread PKG_CPPFLAGS = -pthread -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -include compliance.h -I./Starspace/src Does anyone has a suggestion on what causes the failure of the package on Mac OS? Jan Jan Wijffels Statistician www.bnosac.be | +32 486 611708 [[alternative HTML version deleted]]
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