Mac GUI for 2.9.0 alpha and Rgraphviz

Simon and Kasper,

I have gotten around the problem of the broken entry points by 
directly installing source files  by

 source("http://bioconductor.org/biocLite.R")
 biocLite("graph")

and

 biocLite("Rgraphviz").

Now, everything works like a charm (again).

As I am sure you know, there is still a problem with installing from 
the Packages and Data menu:

Error: could not find function "package.manager"
Error: could not find function "browse.pkgs"

I am using R.app
R.app GUI 1.27 (5372 Tiger build 32-bit), S.Urbanek & S.M.Iacus,

R version 2.9.0 alpha (2009-03-23 r48200)
i386-apple-darwin8.11.1

locale:
en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] grid      stats     graphics  grDevices utils     datasets  methods 
[8] base    

other attached packages:
[1] GPArotation_2008.05-1 Rgraphviz_1.21.9      graph_1.21.4        
[4] MASS_7.2-46           psych_1.0-67        

loaded via a namespace (and not attached):
[1] cluster_1.11.12 tools_2.9.0   


Best wishes,

Bill

On Mar 23, 2009, at 17:33 , William Revelle wrote:

Simon and Kasper,

Simon wrote that

I installed it by hand.  Copying it over from the R2.8.1 library 
into the 2.9.0 (alpha) library.

That won't work. The paths to libR are entirely different - you 
have to re-compile between R 2.8.x and R 2.9.x.

That is fine.  However, I have the other problem (not related to 
the Rgraphviz problem) that I can not download packages because of 
the installer and package manager error.

rror: could not find function "data.manager"
Error: could not find function "browse.pkgs"
Error: could not find function "browse.pkgs"
Error: could not find function "package.manager"

Me culpa - those entry points have been removed, so the GUI needs 
updating. Will fix and keep you posted. Thanks for reporting,
Simon

...

William Revelle		http://personality-project.org/revelle.html
Professor			http://personality-project.org/personality.html
Department of Psychology             http://www.wcas.northwestern.edu/psych/
Northwestern University	http://www.northwestern.edu/
Attend  ISSID/ARP:2009               http://issid.org/issid.2009/