Rgraphviz neato layout crashes
Hello, I am having a problem with Rgraphviz When I try to plot a graph using the "neato" layout, R crashes with a bus error. I am posting to this list because I can not reproduce this on a Windows machine. (but I can reproduce it on multiple macs). This crash can be reproduced just following the example at the beginning of the Rgraphviz vignette. Has anyone else had this problem? Any suggested solutions? Thanks, Julin ps OS 10.4.6, Dual 2.5 G5, 4GB RAM. Graphviz 2.8, compiled from source. Rgraphviz 1.8, compiled from source. pps crash happens both from R.app using quartz and from command line or EMACS using X11.
version
_ platform powerpc-apple-darwin7.9.0 arch powerpc os darwin7.9.0 system powerpc, darwin7.9.0 status major 2 minor 2.1 year 2005 month 12 day 20 svn rev 36812 language R
library(Rgraphviz)
Loading required package: graph Loading required package: cluster Loading required package: Ruuid
set.seed(123) V <- letters[1:10] M <- 1:4 g1 <- randomGraph(V,M,0.2) g1
A graphNEL graph with undirected edges Number of Nodes = 10 Number of Edges = 16
z <- plot(g1) #works! z <- plot(g1,"neato") # will crash...
Bus error Kaweah:~ jmaloof$
Julin Maloof Assistant Professor Section of Plant Biology University of California, Davis 1 Shields Ave Davis, CA, 95616 voice: (530) 752-8077 fax: (530) 752-5410