Funny enough I was trying the same thing today after reading the
discussion
in Baptiste's Physicists thread. I get a very similar error when I started
it in R...
Loading required package: deducer
Warning message:
In library(package, lib.loc = lib.loc, character.only = TRUE,
logical.return
= TRUE, :
there is no package called 'deducer'
Loading required package: Deducer
Loading required package: rJava
Loading required package: JGR
Loading required package: JavaGD
Loading required package: iplots
Note: On Mac OS X we strongly recommend using iplots from within JGR.
Proceed at your own risk as iplots cannot resolve potential ev.loop
deadlocks.
'Yes' is assumed for all dialogs as they cannot be shown without a
deadlock,
also ievent.wait() is disabled.
Error : .onLoad failed in loadNamespace() for 'iplots', details:
call: .jnew("org/rosuda/iplots/Framework")
error: java.lang.InternalError: Can't start the AWT because Java was
started on the first thread. Make sure StartOnFirstThread is not
specified
in your application's Info.plist or on the command line
Failed with error: ?package 'iplots' could not be loaded?
R version 2.13.1 (2011-07-08)
Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
locale:
[1] en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] grid stats graphics grDevices utils datasets methods
base
other attached packages:
[1] JavaGD_0.5-4 rJava_0.9-1 edgeR_2.2.5 quantmod_0.3-15
TTR_0.20-2 xts_0.8-0
[7] zoo_1.7-2 Defaults_1.1-1 tis_1.17 ggplot2_0.8.9
proto_0.3-9.2 reshape_0.8.4
[13] plyr_1.6
loaded via a namespace (and not attached):
[1] digest_0.5.0 lattice_0.19-30 limma_3.8.2 tools_2.13.1
But I downloaded the application from JGR directly and ran it. In JGR it
loaded all the packages just fine. http://www.rforge.net/JGR/files/
I can't say I know how to use it yet though... Just need to RTFM I guess.
Brandon
On Mon, Aug 1, 2011 at 13:20, Alan Kelly <AKELLY at tcd.ie> wrote:
dear all, my intention was to check-out Deducer for teaching purposes.
Deducer would not load indicating problems with loading "iplots". The
error message is the same as that repoduced below when I try to load
JGR.
I've checked the Info.plist file in the R folder and there is no
"StartOnFirstThread" command line.
Any advice on how I might proceed?
Many thanks,
Alan Kelly
Trinity College Dublin
Loading required package: rJava
Loading required package: JavaGD
Loading required package: iplots
Note: On Mac OS X we strongly recommend using iplots from within JGR.
Proceed at your own risk as iplots cannot resolve potential ev.loop
deadlocks.
'Yes' is assumed for all dialogs as they cannot be shown without a
deadlock,
also ievent.wait() is disabled.
Error in .jnew("org/rosuda/iplots/Framework") :
java.lang.InternalError: Can't start the AWT because Java was started
on
the first thread. Make sure StartOnFirstThread is not specified in your
application's Info.plist or on the command line
Error: package 'iplots' could not be loaded
Session Info
R version 2.13.1 (2011-07-08)
Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
locale:
[1] en_US/en_US/en_US/C/en_US/en_US
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] JavaGD_0.5-4 rJava_0.9-1
loaded via a namespace (and not attached):
[1] coda_0.14-2 grid_2.13.1 lattice_0.19-30