Installing hexbin package (bioconductor)
Yup. I've built 1.1-4 (2004-10-27) from source without difficulty, though it doesn't pass CHECK apparently due to a (non-hexbin) related bug in the examples. However, the Release version seems to be 1.0 (and the download link broken at the moment). I'd recommend getting the Developer version of that package as the older hexbin packages were seriously broken in several ways---I think the difference between the two versions is the upgrade from S3/base to S4/grid that Martin Maechler & co. have been doing.
On Nov 9, 2004, at 11:53 AM, hadley wickham wrote:
Has anyone had any luck installing the hexbin package from bioconductor? Using gui and installing from binaries: library(hexbin) gives "Error in library(hexbin) : 'hexbin' is not a valid package -- installed < 2.0.0?" Using gui and installing from source: gives "make: g77: Command not found" (and I do have g77) Using command line and R CMD install: " * Installing *source* package 'hexbin' ... ** libs g77 -fno-common -g -O2 -c hbin.f -o hbin.o g77 -fno-common -g -O2 -c hcell.f -o hcell.o g77 -fno-common -g -O2 -c herode.f -o herode.o g77 -fno-common -g -O2 -c hsm.f -o hsm.ogcc -bundle -flat_namespace -undefined suppress -L/usr/local/lib -o hexbin.so hbin.o hcell.o herode.o hsm.o -L/usr/local/lib -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2 -L/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../.. -lfrtbegin -lg2c -lSystem -lcc_dynamic -framework R ld: warning -L: directory name (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2) does not exist ld: warning -L: directory name (/usr/local/lib/gcc/powerpc-apple-darwin6.8/3.4.2/../../..) does not exist ld: can't locate file for: -lfrtbegin" Any suggestions? Thanks, Hadley
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