Unable to install latest version of package lme4 on mac ox (snow leopard)
On Sep 21, 2009, at 8:23 AM, Dale Steele wrote:
I've been unable to install the latest -31 binary version of lme4 (-28 installs)
-31 doesn't pass make check hence it's not available.
or compile from source from CRAN. Any suggestions on how do make this work?
Install the current R 2.9.2 binary from http://r.research.att.com/ (top of the page) For details read this mailing list. Cheers, Simon
Thanks. --Dale [R.app GUI 1.29 (5483) x86_64-apple-darwin9.8.0] trying URL ' http://www.revolution-computing.com/cran/src/contrib/lme4_0.999375-31.tar.gz ' Content type 'application/x-gzip' length 839548 bytes (819 Kb) opened URL ================================================== downloaded 819 Kb * Installing *source* package ?lme4? ... ** libs ** arch - i386 gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/2.9/Resources/library/ Matrix/include" -I"/Library/Frameworks/R.framework/Resources/library/stats/include" <snip> ..... ** arch - ppc64 gcc-4.2 -arch ppc64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc64 -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/2.9/Resources/library/ Matrix/include" -I"/Library/Frameworks/R.framework/Resources/library/stats/ include" -fPIC -g -O2 -c init.c -o init.o gcc-4.2 -arch ppc64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc64 -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/2.9/Resources/library/ Matrix/include" -I"/Library/Frameworks/R.framework/Resources/library/stats/ include" -fPIC -g -O2 -c lmer.c -o lmer.o gcc-4.2 -arch ppc64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc64 -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/2.9/Resources/library/ Matrix/include" -I"/Library/Frameworks/R.framework/Resources/library/stats/ include" -fPIC -g -O2 -c local_stubs.c -o local_stubs.o gcc-4.2 -arch ppc64 -std=gnu99 -dynamiclib -Wl,- headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o lme4.so init.o lmer.o local_stubs.o -L/Library/Frameworks/R.framework/Resources/lib/ppc64 -lRlapack -L/Library/Frameworks/R.framework/Resources/lib/ppc64 -lRblas - lgfortran -lSystemStubs -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation ld: warning: in /usr/lib/dylib1.10.5.o, missing required architecture ppc64 in file ld: warning: in /usr/lib/libSystemStubs.a, missing required architecture ppc64 in file ld: warning: in /System/Library/Frameworks//CoreFoundation.framework/CoreFoundation, missing required architecture ppc64 in file ld: warning: in /usr/lib/libSystem.dylib, missing required architecture ppc64 in file ld: in /usr/lib/libSystem.B.dylib, missing required architecture ppc64 in file collect2: ld returned 1 exit status make: *** [lme4.so] Error 1 ERROR: compilation failed for package ?lme4? * Removing ?/Library/Frameworks/R.framework/Versions/2.9/Resources/library/lme4? * Restoring previous ?/Library/Frameworks/R.framework/Versions/2.9/Resources/library/lme4? The downloaded packages are in ?/private/var/folders/2E/2EHMWUzSEVmmbPrLUWgh0E+++TI/-Tmp-/ RtmpBl0sui/downloaded_packages?
sessionInfo()
R version 2.9.2 Patched (2009-09-19 r49761)
x86_64-apple-darwin9.8.0
locale:
en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] tools_2.9.2
Warning message:
In install.packages(c("lme4"), lib =
"/Library/Frameworks/R.framework/Resources/library/", :
installation of package 'lme4' had non-zero exit status
[[alternative HTML version deleted]]
_______________________________________________ R-SIG-Mac mailing list R-SIG-Mac at stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/r-sig-mac