Outdated links to the Bioconductor repos in R.app
Herve Pages <hpages at fhcrc.org> writes:
Kasper Daniel Hansen wrote:
I don't. There may be others as well... I'd rather BioC packages be kept separate from CRAN packages in the listing...
I second that. While I am indifferent to what goes on under the hood, the Gui (as it stands right now) should only list Bioconductor packages when selecting either "Bioconductor (sources)" or "Bioconductor (binaries)".
OK so ideally the GUI should use 2 sets of repos:
- one for _displaying_ the list of Bioconductor packages:
http://bioconductor.org/packages/bioc
http://bioconductor.org/packages/data/annotation
http://bioconductor.org/packages/data/experiment
http://bioconductor.org/packages/omegahat
http://bioconductor.org/packages/lindsey
For display purposes in a listing that will be presented to users in the GUI, it would make more sense to me to present three separate bioc repository listings: Bioc software Bioc annotation Bioc experiment The annotation repository contains 636 packages (!) The experiment data repository is small, but expected to grow to the 100's of packages in the near future. + seth