Could not install Package:pdftools in Mac lion 10.7.5
How did you install libpoppler? Such errors typically appear when you link to a shared library which was built with another (incompatible) compiler than the one you use for compiling R packages. Note that Mac lion 10.7.5 has been deprecated for 2 over two years; upgrading your OS is highly recommended. On Tue, Dec 27, 2016 at 7:05 PM, Christofer Bogaso
<bogaso.christofer at gmail.com> wrote:
Hi, I am trying to install "pdftools" package in R from source, however could not succeeded due to following error. Source file is downloaded from https://cran.r-project.org/web/packages/pdftools/index.html Appreciate for any pointer how to install it properly. I am using R version 3.2.1 (2015-06-18) The loading error : tar: Failed to set default locale During startup - Warning messages: 1: Setting LC_CTYPE failed, using "C" 2: Setting LC_TIME failed, using "C" 3: Setting LC_MESSAGES failed, using "C" 4: Setting LC_MONETARY failed, using "C" * installing *source* package 'pdftools' ... ** package 'pdftools' successfully unpacked and MD5 sums checked Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/local/Cellar/poppler/0.50.0/include/poppler/cpp -I/usr/local/Cellar/poppler/0.50.0/include/poppler Using PKG_LIBS=-L/usr/local/Cellar/poppler/0.50.0/lib -lpoppler-cpp ** libs llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/Cellar/poppler/0.50.0/include/poppler/cpp -I/usr/local/Cellar/poppler/0.50.0/include/poppler -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/3.2/Resources/library/Rcpp/include" -fPIC -mtune=core2 -g -O2 -c RcppExports.cpp -o RcppExports.o llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/Cellar/poppler/0.50.0/include/poppler/cpp -I/usr/local/Cellar/poppler/0.50.0/include/poppler -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/3.2/Resources/library/Rcpp/include" -fPIC -mtune=core2 -g -O2 -c bindings.cpp -o bindings.o llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/Cellar/poppler/0.50.0/include/poppler/cpp -I/usr/local/Cellar/poppler/0.50.0/include/poppler -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/3.2/Resources/library/Rcpp/include" -fPIC -mtune=core2 -g -O2 -c init.cpp -o init.o llvm-g++-4.2 -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -L/usr/local/lib -o pdftools.so RcppExports.o bindings.o init.o -L/usr/local/Cellar/poppler/0.50.0/lib -lpoppler-cpp -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Library/Frameworks/R.framework/Versions/3.2/Resources/library/pdftools/libs ** R ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded During startup - Warning messages: 1: Setting LC_CTYPE failed, using "C" 2: Setting LC_TIME failed, using "C" 3: Setting LC_MESSAGES failed, using "C" 4: Setting LC_MONETARY failed, using "C" Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/Library/Frameworks/R.framework/Versions/3.2/Resources/library/pdftools/libs/pdftools.so': dlopen(/Library/Frameworks/R.framework/Versions/3.2/Resources/library/pdftools/libs/pdftools.so, 6): Symbol not found: __ZN7poppler14version_stringEv Referenced from: /Library/Frameworks/R.framework/Versions/3.2/Resources/library/pdftools/libs/pdftools.so Expected in: flat namespace in /Library/Frameworks/R.framework/Versions/3.2/Resources/library/pdftools/libs/pdftools.so Error: loading failed Execution halted ERROR: loading failed * removing '/Library/Frameworks/R.framework/Versions/3.2/Resources/library/pdftools' * restoring previous '/Library/Frameworks/R.framework/Versions/3.2/Resources/library/pdftools'
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