(old) rgl package crashes MacGUI using R 3.2.3 in El Cap, new compiled one does not. (Duncan Murdoch)
On 02/01/2016 12:47 PM, Joseph Kunkel wrote:
Duncan, The rgl (binary) download says it, ver 0.95.1201, is as up to date as binaries are for my MacBook Pro retina early 2013 with OS X El Capitan w. 16 GB ram.
That version is just over a year old. We are getting closer to tracking down the problem with newer ones that has prevented them from being distributed as binaries on OSX, so you will likely find at some point that an "update.packages()" call causes you to jump ahead a lot of versions. You can read the change list here: https://r-forge.r-project.org/scm/viewvc.php/pkg/rgl/inst/NEWS?view=markup&root=rgl (This goes a little newer than the CRAN version.) Duncan Murdoch
Thanks for the quick view of the error codes. Joe Kunkel
On Jan 2, 2016, at 11:47 AM, Duncan Murdoch <murdoch.duncan at gmail.com> wrote: On 02/01/2016 10:23 AM, Joseph Kunkel wrote:
What is the recomendation about upgrading to R 3.2.3 for someone who is now working on a project that is highly invested in using rgl? I am a bit reluctant to fall far behind in upgrades but using the MacGUI and R 3.2.2 is working reasonably well for me.
You didn't say what version of rgl you're using.
I have gotten some error complaints during/after rgl use which might be an indication that I should upgrade? Error 1 in MacGUI window: 2016-01-01 21:52:05.063 R[2942:183303] -deltaZ is deprecated for NSEventTypeMagnify. Please use -magnification.
I don't think this is present in the current rgl. I don't remember if it was there in earlier versions, but your verbose error message doesn't show any rgl activity as far as I can see. Duncan Murdoch
Verbose error 2 in MacGUI window: 2016-01-01 21:33:36.342 R[2942:183303] -[GLView delegate]: unrecognized selector sent to instance 0x7f9690b73a70 2016-01-01 21:33:36.342 R[2942:183303] An uncaught exception was raised 2016-01-01 21:33:36.343 R[2942:183303] -[GLView delegate]: unrecognized selector sent to instance 0x7f9690b73a70 2016-01-01 21:33:36.349 R[2942:183303] ( 0 CoreFoundation 0x00007fff92e77ae2 __exceptionPreprocess + 178 1 libobjc.A.dylib 0x00007fff91c7d73c objc_exception_throw + 48 2 CoreFoundation 0x00007fff92e7ab9d -[NSObject(NSObject) doesNotRecognizeSelector:] + 205 3 CoreFoundation 0x00007fff92db3601 ___forwarding___ + 1009 4 CoreFoundation 0x00007fff92db3188 _CF_forwarding_prep_0 + 120 5 R 0x000000010f78f1aa -[RController validateMenuItem:] + 1002 6 AppKit 0x00007fff8c9a66f6 -[NSMenu _enableItem:] + 706 7 AppKit 0x00007fff8c9b8152 -[NSCarbonMenuImpl _carbonUpdateStatusEvent:handlerCallRef:] + 517 8 AppKit 0x00007fff8c9aaea1 NSSLMMenuEventHandler + 708 9 HIToolbox 0x00007fff9456b7be _ZL23DispatchEventToHandlersP14EventTargetRecP14OpaqueEventRefP14HandlerCallRec + 1231 10 HIToolbox 0x00007fff9456ac48 _ZL30SendEventToEventTargetInternalP14OpaqueEventRefP20OpaqueEventTargetRefP14HandlerCallRec + 404 11 HIToolbox 0x00007fff945809e6 SendEventToEventTarget + 40 12 HIToolbox 0x00007fff945ca99a _ZL18SendHICommandEventjPK9HICommandjjhPKvP20OpaqueEventTargetRefS5_PP14OpaqueEventRef + 411 13 HIToolbox 0x00007fff945dcc2f UpdateHICommandStatusWithCachedEvent + 47 14 HIToolbox 0x00007fff94566deb _ZN13HIApplication12EventHandlerEP25OpaqueEventHandlerCallRefP14OpaqueEventRefPv + 2787 15 HIToolbox 0x00007fff9456b7be _ZL23DispatchEventToHandlersP14EventTargetRecP14OpaqueEventRefP14HandlerCallRec + 1231 16 HIToolbox 0x00007fff9456ac48 _ZL30SendEventToEventTargetInternalP14OpaqueEventRefP20OpaqueEventTargetRefP14HandlerCallRec + 404 17 HIToolbox 0x00007fff945809e6 SendEventToEventTarget + 40 18 HIToolbox 0x00007fff945dc852 _ZL15SendMenuOpeningP14MenuSelectDataP8MenuDatadjjP14__CFDictionaryhPh + 716 19 HIToolbox 0x00007fff945f6d24 _ZL11DrawTheMenuP14MenuSelectDataPP9__CFArrayhPh + 280 20 HIToolbox 0x00007fff945f6a21 _ZL11MenuChangedP14MenuSelectDatahh + 316 21 HIToolbox 0x00007fff94711207 _ZL15TrackMenuCommonR14MenuSelectDataPhP13SelectionDataP10MenuResultS5_ + 1175 22 HIToolbox 0x00007fff945f64fa _ZL14MenuSelectCoreP8MenuData5PointdjPP13OpaqueMenuRefPt + 555 23 HIToolbox 0x00007fff945f6230 _HandleMenuSelection2 + 460 24 AppKit 0x00007fff8c8d575e _NSHandleCarbonMenuEvent + 277 25 AppKit 0x00007fff8c815435 _DPSNextEvent + 1906 26 AppKit 0x00007fff8cbe1943 -[NSApplication _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 454 27 R 0x000000010f79031c -[RController doProcessEvents:] + 204 28 R 0x000000010f78a72a -[RController handleReadConsole:] + 186 29 R 0x000000010f793f99 Re_ReadConsole + 185 30 libR.dylib 0x000000010f9c071f R_ReplDLLdo1 + 143 31 R 0x000000010f7a2367 run_REngineRmainloop + 295 32 R 0x000000010f79673a -[REngine runREPL] + 138 33 R 0x000000010f78574f main + 815 34 libdyld.dylib 0x00007fff8e5e65ad start + 1 35 ??? 0x0000000000000001 0x0 + 1 ) The prior error did not seem to affect the visual output of rgl but is troublesome. Joe Kunkel -?. .? ?. .><((((?>?. .? ?. .><((((?>?. .? ?. .><((((?> .??.? >=- =?}}}}}>< Joseph G. Kunkel, Emeritus Professor Biology Department UMass Amherst Amherst MA 01003 joe at bio.umass.edu
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