On Sep 3, 2022, at 9:04 AM, John Fox <jfox at mcmaster.ca> wrote:
Hi Simon,
My apologies for muddying the waters. Yes, it's been so long that I've worked on a Mac without XQuartz that I forgot to install it -- even though the most common problem with the Rcmdr on Macs is failure to install XQuartz!
But there's still a problem: With XQuartz installed and without the developer tools, loading the Rcmdr or just the tcltk package produces the warning
Warning message:
In system2("/usr/bin/otool", c("-L", shQuote(DSO)), stdout = TRUE) :
running command ''/usr/bin/otool' -L '/Library/Frameworks/R.framework/Resources/library/tcltk/libs//tcltk.so'' had status 1
xcode-select: note: no developer tools were found at '/Applications/Xcode.app', requesting install. Choose an option in the dialog to download the command line developer tools.
and, as this warning states, a dialog box pops up offering to install the developer tools.
I suspect that most users will respond positively and have to wait through a potentially long download, even though tcltk and the Rcmdr load properly if the offer to install the development tools is declined.
Best,
John
On 2022-09-02 3:25 p.m., Simon Urbanek wrote:
John,
Please note that the error is missing X11: tcktk requires XQuartz.
Dev tools are optional and help giving a better error if installed, but they are not required.
Cheers,
Simon
On 3/09/2022, at 05:00, John Fox <jfox at mcmaster.ca> wrote:
?Dear R-SIG-MAC list members,
Unless developer tools are installed, loading the standard tcltk package fails in R 4.2.1 on macOS because of the absence of otool:
------- snip -------
Error: package or namespace load failed for ?tcltk?:
.onLoad failed in loadNamespace() for 'tcltk', details:
call: dyn.load(file, DLLpath = DLLpath, ...)
error: unable to load shared object '/Library/Frameworks/R.framework/Versions/4.2/Resources/library/tcltk/libs/tcltk.so':
dlopen(/Library/Frameworks/R.framework/Versions/4.2/Resources/library/tcltk/libs/tcltk.so, 0x000A): Library not loaded: /opt/X11/lib/libX11.6.dylib
Referenced from: /Library/Frameworks/R.framework/Versions/4.2/Resources/library/tcltk/libs/tcltk.so
Reason: tried: '/opt/X11/lib/libX11.6.dylib' (no such file), '/usr/local/lib/libX11.6.dylib' (no such file), '/usr/lib/libX11.6.dylib' (no such file)
In addition: Warning message:
In system2("/usr/bin/otool", c("-L", shQuote(DSO)), stdout = TRUE) :
running command ''/usr/bin/otool' -L '/Library/Frameworks/R.framework/Resources/library/tcltk/libs//tcltk.so'' had status 1
xcode-select: note: no developer tools were found at '/Applications/Xcode.app', requesting install. Choose an option in the dialog to download the command line developer tools.
R version 4.2.1 (2022-06-23)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS Monterey 12.4
Matrix products: default
BLAS: /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRblas.0.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRlapack.dylib
locale:
[1] en_CA.UTF-8/en_CA.UTF-8/en_CA.UTF-8/C/en_CA.UTF-8/en_CA.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] compiler_4.2.1
------- snip -------
I discovered this issue when a user (cc'd above) wrote to me about having to install the macOS developer tools in order to use the Rcmdr package. I didn't encounter the problem myself because (of course) I have the developer tools installed. I was able to reproduce the problem by dusting off an old Mac without R installed and starting from scratch.
I believe that this issue has arisen before, e.g., on R 3.1.2; see <https://stat.ethz.ch/pipermail/r-sig-mac/2014-December/011260.html>.
Can this be fixed again in R-patched?
Thank you,
John
--
John Fox, Professor Emeritus
McMaster University
Hamilton, Ontario, Canada
web: https://socialsciences.mcmaster.ca/jfox/