The new version of R-devel on http://gifi.stat.ucla.edu/pub has binaries for about 480 packages. It includes native versions of RGtk and some of its friends (RGtkConsole, RGtkViewers, RGtkScrollPane), which allow you to write portable GUI R applications (with the Aqua look on OS X). The caveat is that both RGtk and the GTK+OSX frameworks are still incomplete, so some widgets are inevitably missing. Observe that this version has no support for X11, uses Aqua Tcl/Tk, and is intended to be used from either Terminal.app or Emacs.app, and not from R.app. === Jan de Leeuw; Professor and Chair, UCLA Department of Statistics; Editor: Journal of Multivariate Analysis, Journal of Statistical Software US mail: 9432 Boelter Hall, Box 951554, Los Angeles, CA 90095-1554 phone (310)-825-9550; fax (310)-206-5658; email: deleeuw@stat.ucla.edu homepage: http://gifi.stat.ucla.edu ------------------------------------------------------------------------ ------------------------- No matter where you go, there you are. --- Buckaroo Banzai http://gifi.stat.ucla.edu/sounds/nomatter.au
R-devel with some Gtk
7 messages · Adam Naples, Jan de Leeuw, Simon Urbanek
1 day later
Perhaps this is a silly question for the lis, but I can't seem to get rpy ( http://rpy.sourceforge.net) fully working with this version of R. some basic functions work, but little else. When I try to import the rpy module in python I get the following error. >>> from rpy import * Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library "/Library/Frameworks/R.framework/Versions/2.0.0/Resources/library/ stats/libs/stats.so": dlcompat: dyld: python can't open library: libR.dylib (No such file or directory, errno = 2) Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library "/Library/Frameworks/R.framework/Versions/2.0.0/Resources/library/ methods/libs/methods.so": dlcompat: dyld: python can't open library: libR.dylib (No such file or directory, errno = 2) In addition: Warning message: package stats in options("defaultPackages") was not found but some commands still work such as >>> r.seq(1,10) [1, 2, 3, 4, 5, 6, 7, 8, 9, 10] but if I try to do anything fancier, I get errors and if I try to load a library it crashes. In the README for rpy it tells me I need to build R with the following configure option '--enable-R-shlib I am not at all sure what this means, should I download the source and just rebuild R locally? Any help or clarification would be fantastic. thanks in advance -an
On Jun 3, 2004, at 7:47 PM, Jan de Leeuw wrote:
The new version of R-devel on http://gifi.stat.ucla.edu/pub has binaries for about 480 packages. It includes native versions of RGtk and some of its friends (RGtkConsole, RGtkViewers, RGtkScrollPane), which allow you to write portable GUI R applications (with the Aqua look on OS X). The caveat is that both RGtk and the GTK+OSX frameworks are still incomplete, so some widgets are inevitably missing. Observe that this version has no support for X11, uses Aqua Tcl/Tk, and is intended to be used from either Terminal.app or Emacs.app, and not from R.app. === Jan de Leeuw; Professor and Chair, UCLA Department of Statistics; Editor: Journal of Multivariate Analysis, Journal of Statistical Software US mail: 9432 Boelter Hall, Box 951554, Los Angeles, CA 90095-1554 phone (310)-825-9550; fax (310)-206-5658; email: deleeuw@stat.ucla.edu homepage: http://gifi.stat.ucla.edu ----------------------------------------------------------------------- -------------------------- No matter where you go, there you are. --- Buckaroo Banzai http://gifi.stat.ucla.edu/sounds/nomatter.au
_______________________________________________ R-SIG-Mac mailing list R-SIG-Mac@stat.math.ethz.ch https://www.stat.math.ethz.ch/mailman/listinfo/r-sig-mac
Where and how did you get your rpy ? -- Jan
On Jun 4, 2004, at 22:12, Adam Naples wrote:
Perhaps this is a silly question for the lis, but I can't seem to get rpy ( http://rpy.sourceforge.net) fully working with this version of R. some basic functions work, but little else. When I try to import the rpy module in python I get the following error.
>>> from rpy import *
Error in dyn.load(x, as.logical(local), as.logical(now)) :
unable to load shared library
"/Library/Frameworks/R.framework/Versions/2.0.0/Resources/library/
stats/libs/stats.so":
dlcompat: dyld: python can't open library: libR.dylib (No such
file or directory, errno = 2)
Error in dyn.load(x, as.logical(local), as.logical(now)) :
unable to load shared library
"/Library/Frameworks/R.framework/Versions/2.0.0/Resources/library/
methods/libs/methods.so":
dlcompat: dyld: python can't open library: libR.dylib (No such
file or directory, errno = 2)
In addition: Warning message:
package stats in options("defaultPackages") was not found
but some commands still work such as
>>> r.seq(1,10)
[1, 2, 3, 4, 5, 6, 7, 8, 9, 10] but if I try to do anything fancier, I get errors and if I try to load a library it crashes. In the README for rpy it tells me I need to build R with the following configure option '--enable-R-shlib I am not at all sure what this means, should I download the source and just rebuild R locally? Any help or clarification would be fantastic. thanks in advance -an On Jun 3, 2004, at 7:47 PM, Jan de Leeuw wrote:
The new version of R-devel on http://gifi.stat.ucla.edu/pub has binaries for about 480 packages. It includes native versions of RGtk and some of its friends (RGtkConsole, RGtkViewers, RGtkScrollPane), which allow you to write portable GUI R applications (with the Aqua look on OS X). The caveat is that both RGtk and the GTK+OSX frameworks are still incomplete, so some widgets are inevitably missing. Observe that this version has no support for X11, uses Aqua Tcl/Tk, and is intended to be used from either Terminal.app or Emacs.app, and not from R.app. === Jan de Leeuw; Professor and Chair, UCLA Department of Statistics; Editor: Journal of Multivariate Analysis, Journal of Statistical Software US mail: 9432 Boelter Hall, Box 951554, Los Angeles, CA 90095-1554 phone (310)-825-9550; fax (310)-206-5658; email: deleeuw@stat.ucla.edu homepage: http://gifi.stat.ucla.edu ---------------------------------------------------------------------- --------------------------- No matter where you go, there you are. --- Buckaroo Banzai http://gifi.stat.ucla.edu/sounds/nomatter.au
_______________________________________________ R-SIG-Mac mailing list R-SIG-Mac@stat.math.ethz.ch https://www.stat.math.ethz.ch/mailman/listinfo/r-sig-mac
_______________________________________________ R-SIG-Mac mailing list R-SIG-Mac@stat.math.ethz.ch https://www.stat.math.ethz.ch/mailman/listinfo/r-sig-mac
=== Jan de Leeuw; Professor and Chair, UCLA Department of Statistics; Editor: Journal of Multivariate Analysis, Journal of Statistical Software US mail: 8130 Math Sciences Bldg, Box 951554, Los Angeles, CA 90095-1554 phone (310)-825-9550; fax (310)-206-5658; email: deleeuw@stat.ucla.edu homepage: http://gifi.stat.ucla.edu ------------------------------------------------------------------------ ------------------------- No matter where you go, there you are. --- Buckaroo Banzai http://gifi.stat.ucla.edu/sounds/nomatter.au
I downloaded it from rpy.sourceforge.net and just did a 'python setup.py install' I am running 10.3.4 with the installed apple python and a few extra modules (PyX, PyObjC, Twisted, etc) Thanks -an
On Jun 5, 2004, at 1:26 AM, Jan de Leeuw wrote:
Where and how did you get your rpy ? -- Jan On Jun 4, 2004, at 22:12, Adam Naples wrote:
Perhaps this is a silly question for the lis, but I can't seem to get rpy ( http://rpy.sourceforge.net) fully working with this version of R. some basic functions work, but little else. When I try to import the rpy module in python I get the following error.
>>> from rpy import *
Error in dyn.load(x, as.logical(local), as.logical(now)) :
unable to load shared library
"/Library/Frameworks/R.framework/Versions/2.0.0/Resources/library/
stats/libs/stats.so":
dlcompat: dyld: python can't open library: libR.dylib (No such
file or directory, errno = 2)
Error in dyn.load(x, as.logical(local), as.logical(now)) :
unable to load shared library
"/Library/Frameworks/R.framework/Versions/2.0.0/Resources/library/
methods/libs/methods.so":
dlcompat: dyld: python can't open library: libR.dylib (No such
file or directory, errno = 2)
In addition: Warning message:
package stats in options("defaultPackages") was not found
but some commands still work such as
>>> r.seq(1,10)
[1, 2, 3, 4, 5, 6, 7, 8, 9, 10] but if I try to do anything fancier, I get errors and if I try to load a library it crashes. In the README for rpy it tells me I need to build R with the following configure option '--enable-R-shlib I am not at all sure what this means, should I download the source and just rebuild R locally? Any help or clarification would be fantastic. thanks in advance -an On Jun 3, 2004, at 7:47 PM, Jan de Leeuw wrote:
The new version of R-devel on http://gifi.stat.ucla.edu/pub has binaries for about 480 packages. It includes native versions of RGtk and some of its friends (RGtkConsole, RGtkViewers, RGtkScrollPane), which allow you to write portable GUI R applications (with the Aqua look on OS X). The caveat is that both RGtk and the GTK+OSX frameworks are still incomplete, so some widgets are inevitably missing. Observe that this version has no support for X11, uses Aqua Tcl/Tk, and is intended to be used from either Terminal.app or Emacs.app, and not from R.app. === Jan de Leeuw; Professor and Chair, UCLA Department of Statistics; Editor: Journal of Multivariate Analysis, Journal of Statistical Software US mail: 9432 Boelter Hall, Box 951554, Los Angeles, CA 90095-1554 phone (310)-825-9550; fax (310)-206-5658; email: deleeuw@stat.ucla.edu homepage: http://gifi.stat.ucla.edu --------------------------------------------------------------------- ---------------------------- No matter where you go, there you are. --- Buckaroo Banzai http://gifi.stat.ucla.edu/sounds/nomatter.au
_______________________________________________ R-SIG-Mac mailing list R-SIG-Mac@stat.math.ethz.ch https://www.stat.math.ethz.ch/mailman/listinfo/r-sig-mac
_______________________________________________ R-SIG-Mac mailing list R-SIG-Mac@stat.math.ethz.ch https://www.stat.math.ethz.ch/mailman/listinfo/r-sig-mac
=== Jan de Leeuw; Professor and Chair, UCLA Department of Statistics; Editor: Journal of Multivariate Analysis, Journal of Statistical Software US mail: 8130 Math Sciences Bldg, Box 951554, Los Angeles, CA 90095-1554 phone (310)-825-9550; fax (310)-206-5658; email: deleeuw@stat.ucla.edu homepage: http://gifi.stat.ucla.edu ----------------------------------------------------------------------- -------------------------- No matter where you go, there you are. --- Buckaroo Banzai http://gifi.stat.ucla.edu/sounds/nomatter.au ----------------------------------------------------------------------- --------------------------
Hi, I managed to get it working, although I think I may have used some
hideous hack.
I made an alias (using the finder) to libR.dylib from the
/library/frameworks/r.framework/ and replaced the one in /usr/local/lib
this managed to change my error messages to the following
Error in dyn.load(x, as.logical(local), as.logical(now)) :
unable to load shared library
"/Library/Frameworks/R.framework/Versions/2.0.0/Resources/library/
stats/libs/stats.so":
dlcompat: dyld: python truncated or malformed library:
/usr/local/lib/libR.dylib (file is empty)
Error in dyn.load(x, as.logical(local), as.logical(now)) :
unable to load shared library
"/Library/Frameworks/R.framework/Versions/2.0.0/Resources/library/
methods/libs/methods.so":
dlcompat: dyld: python truncated or malformed library:
/usr/local/lib/libR.dylib (file is empty)
In addition: Warning message:
package stats in options("defaultPackages") was not found
Then I just copied the entire libR.dylib file from the R.framework/lib
directory to /usr/local/lib
now, it seems to work flawlessly. Although I am worried that I may have
done something terrible.
This helped me out, maybe some other new users will find it helpful.
thanks
-an
On Jun 5, 2004, at 1:26 AM, Jan de Leeuw wrote:
Where and how did you get your rpy ? -- Jan On Jun 4, 2004, at 22:12, Adam Naples wrote:
Perhaps this is a silly question for the lis, but I can't seem to get rpy ( http://rpy.sourceforge.net) fully working with this version of R. some basic functions work, but little else. When I try to import the rpy module in python I get the following error.
>>> from rpy import *
Error in dyn.load(x, as.logical(local), as.logical(now)) :
unable to load shared library
"/Library/Frameworks/R.framework/Versions/2.0.0/Resources/library/
stats/libs/stats.so":
dlcompat: dyld: python can't open library: libR.dylib (No such
file or directory, errno = 2)
Error in dyn.load(x, as.logical(local), as.logical(now)) :
unable to load shared library
"/Library/Frameworks/R.framework/Versions/2.0.0/Resources/library/
methods/libs/methods.so":
dlcompat: dyld: python can't open library: libR.dylib (No such
file or directory, errno = 2)
In addition: Warning message:
package stats in options("defaultPackages") was not found
but some commands still work such as
>>> r.seq(1,10)
[1, 2, 3, 4, 5, 6, 7, 8, 9, 10] but if I try to do anything fancier, I get errors and if I try to load a library it crashes. In the README for rpy it tells me I need to build R with the following configure option '--enable-R-shlib I am not at all sure what this means, should I download the source and just rebuild R locally? Any help or clarification would be fantastic. thanks in advance -an On Jun 3, 2004, at 7:47 PM, Jan de Leeuw wrote:
The new version of R-devel on http://gifi.stat.ucla.edu/pub has binaries for about 480 packages. It includes native versions of RGtk and some of its friends (RGtkConsole, RGtkViewers, RGtkScrollPane), which allow you to write portable GUI R applications (with the Aqua look on OS X). The caveat is that both RGtk and the GTK+OSX frameworks are still incomplete, so some widgets are inevitably missing. Observe that this version has no support for X11, uses Aqua Tcl/Tk, and is intended to be used from either Terminal.app or Emacs.app, and not from R.app. === Jan de Leeuw; Professor and Chair, UCLA Department of Statistics; Editor: Journal of Multivariate Analysis, Journal of Statistical Software US mail: 9432 Boelter Hall, Box 951554, Los Angeles, CA 90095-1554 phone (310)-825-9550; fax (310)-206-5658; email: deleeuw@stat.ucla.edu homepage: http://gifi.stat.ucla.edu --------------------------------------------------------------------- ---------------------------- No matter where you go, there you are. --- Buckaroo Banzai http://gifi.stat.ucla.edu/sounds/nomatter.au
_______________________________________________ R-SIG-Mac mailing list R-SIG-Mac@stat.math.ethz.ch https://www.stat.math.ethz.ch/mailman/listinfo/r-sig-mac
_______________________________________________ R-SIG-Mac mailing list R-SIG-Mac@stat.math.ethz.ch https://www.stat.math.ethz.ch/mailman/listinfo/r-sig-mac
=== Jan de Leeuw; Professor and Chair, UCLA Department of Statistics; Editor: Journal of Multivariate Analysis, Journal of Statistical Software US mail: 8130 Math Sciences Bldg, Box 951554, Los Angeles, CA 90095-1554 phone (310)-825-9550; fax (310)-206-5658; email: deleeuw@stat.ucla.edu homepage: http://gifi.stat.ucla.edu ----------------------------------------------------------------------- -------------------------- No matter where you go, there you are. --- Buckaroo Banzai http://gifi.stat.ucla.edu/sounds/nomatter.au ----------------------------------------------------------------------- --------------------------
On Jun 5, 2004, at 10:19 AM, Adam Naples wrote:
Then I just copied the entire libR.dylib file from the R.framework/lib directory to /usr/local/lib now, it seems to work flawlessly. Although I am worried that I may have done something terrible.
Easier solution should be to just append /Library/Frameworks/R.framework/Resources/bin to DYLIB_LIBRARY_PATH (see the R shell script). Usually it's a better idea to modify the library path than to copy things ... but I don't have rpy here - it's just a general advice ;). Cheers, Simon --- Simon Urbanek Department of computer oriented statistics and data analysis University of Augsburg Universit?tsstr. 14 86135 Augsburg Germany Tel: +49-821-598-2236 Fax: +49-821-598-2200 Simon.Urbanek@Math.Uni-Augsburg.de http://simon.urbanek.info
On Jun 5, 2004, at 11:13 AM, Simon Urbanek wrote:
Easier solution should be to just append /Library/Frameworks/R.framework/Resources/bin to DYLIB_LIBRARY_PATH (see the R shell script).
oops, that should read DYLD_LIBRARY_PATH of course ... (see "man dyld" ) --- Simon Urbanek Department of computer oriented statistics and data analysis University of Augsburg Universit?tsstr. 14 86135 Augsburg Germany Tel: +49-821-598-2236 Fax: +49-821-598-2200 Simon.Urbanek@Math.Uni-Augsburg.de http://simon.urbanek.info