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rgl::writeWebGL( , prefix = , )

1 message · David Winsemius

#
On Feb 3, 2015, at 9:42 AM, Duncan Murdoch wrote:

            
It's probably more appropriate that this go to the R-sig-Ma mailing list. I have had XQuartz installed for several years and iterations of R and I just re-installed version 2.7.7 from http://xquartz.macosforge.org/trac/wiki/X112.7.7

As far as I can tell from the xquartz plist, it is in the right place and would be called if X11 were desired. I do still see an X11.app entry in my applications/Utilities directory from a couple of years ago, though.

Compiling from source with:

R CMD INSTALL /Users/davidwinsemius/Downloads/rgl_0.95.1201.tar.gz 

... fails with the same error message

I think the Mac builders may have a better understanding why the CRAN package checks are failing than I do.

Copying first the Terminal session output and then my sessionInfo() after opening R:

Loading required package: lattice
Loading required package: sos
Loading required package: brew
Loading required package: rms
Loading required package: Hmisc
Loading required package: grid
Loading required package: survival
Loading required package: stats
Loading required package: utils

Attaching package: ?utils?

The following object is masked from ?package:sos?:

    ?

Loading required package: graphics
Loading required package: splines
Loading required package: Formula

Attaching package: ?Hmisc?

The following objects are masked from ?package:base?:

    format.pval, round.POSIXt, trunc.POSIXt, units

Loading required package: SparseM

Attaching package: ?SparseM?

The following object is masked from ?package:base?:

    backsolve

##------ 2015-02-03 ------##
* installing to library ?/Library/Frameworks/R.framework/Versions/3.1/Resources/library?
* installing *source* package ?rgl? ...
** package ?rgl? successfully unpacked and MD5 sums checked
checking for gcc... llvm-gcc-4.2 -arch x86_64 -std=gnu99
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether llvm-gcc-4.2 -arch x86_64 -std=gnu99 accepts -g... yes
checking for llvm-gcc-4.2 -arch x86_64 -std=gnu99 option to accept ISO C89... none needed
checking how to run the C preprocessor... llvm-gcc-4.2 -arch x86_64 -std=gnu99 -E
checking for gcc... (cached) llvm-gcc-4.2 -arch x86_64 -std=gnu99
checking whether we are using the GNU C compiler... (cached) yes
checking whether llvm-gcc-4.2 -arch x86_64 -std=gnu99 accepts -g... (cached) yes
checking for llvm-gcc-4.2 -arch x86_64 -std=gnu99 option to accept ISO C89... (cached) none needed
checking whether __attribute__((visibility())) is supported... no
checking whether llvm-gcc-4.2 -arch x86_64 -std=gnu99 accepts -fvisibility... yes
checking whether  accepts -fvisibility... no
checking for libpng-config... yes
configure: using libpng-config
configure: using libpng dynamic linkage
checking for X... libraries , headers 
checking for glEnd in -lGL... no
configure: error: missing required library GL
ERROR: configuration failed for package ?rgl?
* removing ?/Library/Frameworks/R.framework/Versions/3.1/Resources/library/rgl?
* restoring previous ?/Library/Frameworks/R.framework/Versions/3.1/Resources/library/rgl?

==============================================
R version 3.1.2 (2014-10-31)
Platform: x86_64-apple-darwin10.8.0 (64-bit)

locale:
[1] en_US.utf-8/en_US.utf-8/en_US.utf-8/C/en_US.utf-8/en_US.utf-8

attached base packages:
[1] grDevices datasets  splines   graphics  utils     stats     grid     
[8] methods   base     

other attached packages:
[1] rms_4.2-1       SparseM_1.6     Hmisc_3.14-6    Formula_1.2-0  
[5] survival_2.37-7 sos_1.3-8       brew_1.0-6      lattice_0.20-29

loaded via a namespace (and not attached):
 [1] acepack_1.3-3.3     cluster_1.15.3      foreign_0.8-62     
 [4] latticeExtra_0.6-26 multcomp_1.3-8      mvtnorm_1.0-2      
 [7] nlme_3.1-119        nnet_7.3-8          polspline_1.1.9    
[10] quantreg_5.11       RColorBrewer_1.1-2  rpart_4.1-8        
[13] sandwich_2.3-2      TH.data_1.0-6       zoo_1.7-11